Detailed information NTG0752304

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: OKW88_RS16860
• Genome accession: NZ_CP110105
• Coordinates: 3293718..3294866 (+)
• Length: 382 a.a.
• NCBI ID: WP_122895033.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain CF03
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3288718..3299866

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OKW88_RS16840 (OKW88_16820)	yclH	3289095..3289775 (-)	681	WP_038428353.1	ABC transporter ATP-binding protein	-
OKW88_RS16845 (OKW88_16825)	yclI	3289791..3291251 (-)	1461	WP_224912756.1	ABC transporter permease	-
OKW88_RS16850 (OKW88_16830)	yclJ	3291464..3292147 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
OKW88_RS16855 (OKW88_16835)	yclK	3292134..3293555 (+)	1422	WP_122895032.1	two-component system sensor histidine kinase YclK	-
OKW88_RS16860 (OKW88_16840)	rapC	3293718..3294866 (+)	1149	WP_122895033.1	response regulator aspartate phosphatase RapC	Regulator
OKW88_RS16865 (OKW88_16845)	phrC	3294850..3294972 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
OKW88_RS16870 (OKW88_16850)	yczM	3295072..3295161 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
OKW88_RS16875 (OKW88_16855)	yczN	3295243..3295356 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
OKW88_RS16880 (OKW88_16860)	thrD	3295509..3296873 (-)	1365	WP_342006778.1	aspartate kinase	-
OKW88_RS16885 (OKW88_16865)	ceuB	3297258..3298208 (+)	951	WP_014475804.1	petrobactin ABC transporter permease YclN	Machinery gene
OKW88_RS16890 (OKW88_16870)	yclO	3298201..3299148 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45649.69 Da
• Isoelectric Point: 5.0423

>NTDB_id=752304 OKW88_RS16860 WP_122895033.1 3293718..3294866(+) (rapC) [Bacillus subtilis strain CF03]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLKSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=752304 OKW88_RS16860 WP_122895033.1 3293718..3294866(+) (rapC) [Bacillus subtilis strain CF03]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAATCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAGTTTGATAAGCGTGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTTTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAATGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTTGAGTTTTTGAAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.476	100	0.995
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571