Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | OLL95_RS04495 | Genome accession | NZ_CP110054 |
| Coordinates | 902471..902998 (+) | Length | 175 a.a. |
| NCBI ID | WP_142960522.1 | Uniprot ID | - |
| Organism | Enterococcus faecalis strain BE17 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 891401..939267 | 902471..902998 | within | 0 |
Gene organization within MGE regions
Location: 891401..939267
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OLL95_RS04385 (OLL95_04385) | - | 891401..892582 (-) | 1182 | WP_231411508.1 | site-specific integrase | - |
| OLL95_RS04390 (OLL95_04390) | - | 892758..893441 (-) | 684 | WP_141442172.1 | hypothetical protein | - |
| OLL95_RS04395 (OLL95_04395) | - | 893531..893764 (+) | 234 | WP_002367290.1 | hypothetical protein | - |
| OLL95_RS04400 (OLL95_04400) | - | 893789..894052 (-) | 264 | Protein_845 | toxin | - |
| OLL95_RS04405 (OLL95_04405) | - | 894160..894678 (-) | 519 | WP_002404532.1 | hypothetical protein | - |
| OLL95_RS04410 (OLL95_04410) | - | 894766..895188 (-) | 423 | WP_049098636.1 | ImmA/IrrE family metallo-endopeptidase | - |
| OLL95_RS04415 (OLL95_04415) | - | 895206..895526 (-) | 321 | WP_002404534.1 | helix-turn-helix domain-containing protein | - |
| OLL95_RS04420 (OLL95_04420) | - | 895822..896004 (+) | 183 | WP_002404535.1 | hypothetical protein | - |
| OLL95_RS04425 (OLL95_04425) | - | 896017..896286 (+) | 270 | WP_002365131.1 | hypothetical protein | - |
| OLL95_RS04430 (OLL95_04430) | - | 896320..896526 (+) | 207 | WP_010822644.1 | hypothetical protein | - |
| OLL95_RS04435 (OLL95_04435) | - | 896531..896686 (+) | 156 | WP_010822645.1 | hypothetical protein | - |
| OLL95_RS04440 (OLL95_04440) | - | 896676..896885 (-) | 210 | WP_142960439.1 | hypothetical protein | - |
| OLL95_RS04445 (OLL95_04445) | - | 897064..897486 (-) | 423 | WP_010828994.1 | hypothetical protein | - |
| OLL95_RS04450 (OLL95_04450) | - | 897566..898276 (+) | 711 | WP_104884670.1 | Rha family transcriptional regulator | - |
| OLL95_RS04455 (OLL95_04455) | - | 898287..898472 (+) | 186 | WP_002357337.1 | hypothetical protein | - |
| OLL95_RS04460 (OLL95_04460) | - | 898484..898657 (+) | 174 | WP_002406302.1 | hypothetical protein | - |
| OLL95_RS04465 (OLL95_04465) | - | 898855..898977 (+) | 123 | WP_002399179.1 | hypothetical protein | - |
| OLL95_RS04470 (OLL95_04470) | - | 898961..899440 (+) | 480 | WP_002381628.1 | siphovirus Gp157 family protein | - |
| OLL95_RS04475 (OLL95_04475) | - | 899452..900468 (+) | 1017 | WP_002365157.1 | AAA family ATPase | - |
| OLL95_RS04480 (OLL95_04480) | - | 900473..901114 (+) | 642 | WP_010783684.1 | putative HNHc nuclease | - |
| OLL95_RS04485 (OLL95_04485) | - | 901182..901604 (+) | 423 | WP_264547791.1 | hypothetical protein | - |
| OLL95_RS04490 (OLL95_04490) | - | 901624..902466 (+) | 843 | WP_264547810.1 | DNA replication protein | - |
| OLL95_RS04495 (OLL95_04495) | ssb | 902471..902998 (+) | 528 | WP_142960522.1 | single-stranded DNA-binding protein | Machinery gene |
| OLL95_RS04500 (OLL95_04500) | - | 903010..903339 (+) | 330 | WP_174098288.1 | hypothetical protein | - |
| OLL95_RS04505 (OLL95_04505) | - | 903359..903565 (+) | 207 | WP_002393799.1 | hypothetical protein | - |
| OLL95_RS04510 (OLL95_04510) | - | 903618..904382 (+) | 765 | WP_126268785.1 | site-specific DNA-methyltransferase | - |
| OLL95_RS04515 (OLL95_04515) | - | 904426..904788 (+) | 363 | WP_085390508.1 | YopX family protein | - |
| OLL95_RS04520 (OLL95_04520) | - | 904789..905142 (+) | 354 | WP_264547792.1 | hypothetical protein | - |
| OLL95_RS04525 (OLL95_04525) | - | 905312..905503 (+) | 192 | WP_264547793.1 | hypothetical protein | - |
| OLL95_RS04530 (OLL95_04530) | - | 905503..905679 (+) | 177 | WP_185933018.1 | hypothetical protein | - |
| OLL95_RS04535 (OLL95_04535) | - | 905718..906224 (+) | 507 | WP_264547794.1 | YopX family protein | - |
| OLL95_RS04540 (OLL95_04540) | - | 906221..906415 (+) | 195 | WP_174116374.1 | hypothetical protein | - |
| OLL95_RS04545 (OLL95_04545) | - | 906412..906660 (+) | 249 | WP_174116373.1 | hypothetical protein | - |
| OLL95_RS04550 (OLL95_04550) | - | 906653..906859 (+) | 207 | WP_174116372.1 | hypothetical protein | - |
| OLL95_RS04555 (OLL95_04555) | - | 906856..907401 (+) | 546 | WP_264547795.1 | DUF1642 domain-containing protein | - |
| OLL95_RS04560 (OLL95_04560) | - | 907402..907563 (+) | 162 | WP_162837175.1 | hypothetical protein | - |
| OLL95_RS04565 (OLL95_04565) | - | 907563..907754 (+) | 192 | WP_264547796.1 | hypothetical protein | - |
| OLL95_RS04570 (OLL95_04570) | - | 907899..908315 (+) | 417 | WP_264547797.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
| OLL95_RS04580 (OLL95_04580) | - | 908847..909461 (+) | 615 | WP_264547798.1 | hypothetical protein | - |
| OLL95_RS04585 (OLL95_04585) | - | 910065..910526 (+) | 462 | WP_002414515.1 | terminase small subunit | - |
| OLL95_RS04590 (OLL95_04590) | - | 910513..911790 (+) | 1278 | WP_173944846.1 | PBSX family phage terminase large subunit | - |
| OLL95_RS04595 (OLL95_04595) | - | 911803..913272 (+) | 1470 | WP_064687108.1 | phage portal protein | - |
| OLL95_RS04600 (OLL95_04600) | - | 913250..914296 (+) | 1047 | WP_202518409.1 | phage head morphogenesis protein | - |
| OLL95_RS04605 (OLL95_04605) | - | 914299..914619 (+) | 321 | WP_002414520.1 | hypothetical protein | - |
| OLL95_RS04610 (OLL95_04610) | - | 914624..914920 (+) | 297 | WP_164548112.1 | hypothetical protein | - |
| OLL95_RS04615 (OLL95_04615) | - | 915089..915715 (+) | 627 | WP_264547799.1 | DUF4355 domain-containing protein | - |
| OLL95_RS04620 (OLL95_04620) | - | 915729..916631 (+) | 903 | WP_264547800.1 | DUF5309 domain-containing protein | - |
| OLL95_RS04625 (OLL95_04625) | - | 916655..916891 (+) | 237 | WP_002402418.1 | hypothetical protein | - |
| OLL95_RS04630 (OLL95_04630) | - | 916900..917244 (+) | 345 | WP_002395886.1 | hypothetical protein | - |
| OLL95_RS04635 (OLL95_04635) | - | 917241..917618 (+) | 378 | WP_002404932.1 | hypothetical protein | - |
| OLL95_RS04640 (OLL95_04640) | - | 917611..918009 (+) | 399 | WP_002402415.1 | HK97 gp10 family phage protein | - |
| OLL95_RS04645 (OLL95_04645) | - | 918013..918387 (+) | 375 | WP_016634615.1 | DUF6838 family protein | - |
| OLL95_RS04650 (OLL95_04650) | - | 918388..919230 (+) | 843 | WP_202531045.1 | major tail protein | - |
| OLL95_RS04655 (OLL95_04655) | gpG | 919283..919636 (+) | 354 | WP_002364485.1 | phage tail assembly chaperone G | - |
| OLL95_RS04660 (OLL95_04660) | - | 919885..922782 (+) | 2898 | WP_264547811.1 | tape measure protein | - |
| OLL95_RS04665 (OLL95_04665) | - | 922772..923506 (+) | 735 | WP_002364482.1 | tail protein | - |
| OLL95_RS04670 (OLL95_04670) | - | 923488..926211 (+) | 2724 | WP_264547801.1 | phage tail spike protein | - |
| OLL95_RS04675 (OLL95_04675) | - | 926226..927134 (+) | 909 | WP_264547802.1 | phage baseplate upper protein | - |
| OLL95_RS04680 (OLL95_04680) | - | 927127..927444 (+) | 318 | WP_021732959.1 | hypothetical protein | - |
| OLL95_RS04685 (OLL95_04685) | - | 927437..927754 (+) | 318 | WP_021732960.1 | hypothetical protein | - |
| OLL95_RS04690 (OLL95_04690) | - | 927754..928266 (+) | 513 | WP_264547803.1 | hypothetical protein | - |
| OLL95_RS04695 (OLL95_04695) | - | 928281..928655 (+) | 375 | WP_173944875.1 | hypothetical protein | - |
| OLL95_RS04700 (OLL95_04700) | - | 928655..928777 (+) | 123 | WP_002395770.1 | XkdX family protein | - |
| OLL95_RS04705 (OLL95_04705) | - | 928783..928992 (+) | 210 | WP_029682685.1 | BhlA/UviB family holin-like peptide | - |
| OLL95_RS04710 (OLL95_04710) | - | 929034..930137 (+) | 1104 | WP_264547804.1 | SH3 domain-containing protein | - |
| OLL95_RS04715 (OLL95_04715) | - | 931097..932161 (+) | 1065 | WP_002362350.1 | FUSC family protein | - |
| OLL95_RS04720 (OLL95_04720) | - | 932867..933247 (+) | 381 | WP_088775801.1 | transcriptional regulator | - |
| OLL95_RS04725 (OLL95_04725) | - | 933340..934467 (+) | 1128 | WP_002362348.1 | lysozyme | - |
| OLL95_RS14680 | - | 935048..935228 (-) | 181 | Protein_910 | hypothetical protein | - |
| OLL95_RS04730 (OLL95_04730) | - | 935482..937035 (-) | 1554 | WP_025186367.1 | membrane protein | - |
| OLL95_RS04735 (OLL95_04735) | - | 937126..937701 (-) | 576 | WP_002356327.1 | DUF805 domain-containing protein | - |
| OLL95_RS04740 (OLL95_04740) | - | 937867..938637 (+) | 771 | WP_002356329.1 | alpha/beta fold hydrolase | - |
| OLL95_RS04745 (OLL95_04745) | - | 938725..939267 (+) | 543 | WP_002362346.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19435.32 Da Isoelectric Point: 4.6228
>NTDB_id=751850 OLL95_RS04495 WP_142960522.1 902471..902998(+) (ssb) [Enterococcus faecalis strain BE17]
MINQVVLVGRLTKDIDLRYTASGSAVGSFTLAVNRNFTNQNGEREADFINCVIWRKPAETMANYARKGTLLGVVGRIQTR
NYDNQQGQRVYVTEVVCESFQLLESKSTNENRNSIQTSQDDSTSVQNDFEGKYTTNQNKGLNQQNNSKQMSFGGDVDPFA
GAGNSIDISDDDLPF
MINQVVLVGRLTKDIDLRYTASGSAVGSFTLAVNRNFTNQNGEREADFINCVIWRKPAETMANYARKGTLLGVVGRIQTR
NYDNQQGQRVYVTEVVCESFQLLESKSTNENRNSIQTSQDDSTSVQNDFEGKYTTNQNKGLNQQNNSKQMSFGGDVDPFA
GAGNSIDISDDDLPF
Nucleotide
Download Length: 528 bp
>NTDB_id=751850 OLL95_RS04495 WP_142960522.1 902471..902998(+) (ssb) [Enterococcus faecalis strain BE17]
ATGATAAACCAAGTTGTGTTAGTTGGACGTTTAACGAAAGATATAGATTTACGCTACACCGCAAGTGGTTCTGCAGTTGG
AAGCTTTACTCTTGCTGTGAACCGTAACTTTACAAACCAAAACGGCGAACGAGAAGCAGATTTTATCAACTGTGTAATTT
GGCGTAAGCCTGCTGAAACAATGGCTAATTATGCTCGCAAAGGAACATTATTAGGAGTTGTTGGAAGAATTCAAACTCGT
AATTATGACAACCAACAAGGCCAACGTGTCTATGTGACTGAAGTTGTTTGCGAGAGTTTCCAATTATTGGAATCAAAAAG
TACAAACGAGAATAGAAATAGCATTCAGACGTCACAGGATGACAGTACAAGCGTTCAAAATGATTTCGAGGGTAAATATA
CCACAAATCAAAACAAAGGCTTAAATCAGCAAAATAATAGCAAACAAATGTCGTTTGGCGGAGATGTAGATCCGTTCGCA
GGCGCAGGTAATTCAATCGACATTAGCGACGATGATCTACCGTTCTAG
ATGATAAACCAAGTTGTGTTAGTTGGACGTTTAACGAAAGATATAGATTTACGCTACACCGCAAGTGGTTCTGCAGTTGG
AAGCTTTACTCTTGCTGTGAACCGTAACTTTACAAACCAAAACGGCGAACGAGAAGCAGATTTTATCAACTGTGTAATTT
GGCGTAAGCCTGCTGAAACAATGGCTAATTATGCTCGCAAAGGAACATTATTAGGAGTTGTTGGAAGAATTCAAACTCGT
AATTATGACAACCAACAAGGCCAACGTGTCTATGTGACTGAAGTTGTTTGCGAGAGTTTCCAATTATTGGAATCAAAAAG
TACAAACGAGAATAGAAATAGCATTCAGACGTCACAGGATGACAGTACAAGCGTTCAAAATGATTTCGAGGGTAAATATA
CCACAAATCAAAACAAAGGCTTAAATCAGCAAAATAATAGCAAACAAATGTCGTTTGGCGGAGATGTAGATCCGTTCGCA
GGCGCAGGTAATTCAATCGACATTAGCGACGATGATCTACCGTTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.659 |
100 |
0.6 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56 |
100 |
0.56 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
60.571 |
0.36 |