Detailed information NTG0750971

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: OHM49_RS00775
• Genome accession: NZ_CP109940
• Coordinates: 124514..124948 (+)
• Length: 144 a.a.
• NCBI ID: WP_029750050.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ID34572
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 119514..129948

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHM49_RS00740 (OHM49_00740)	-	120256..120621 (+)	366	WP_002936568.1	DUF1033 family protein	-
OHM49_RS00745 (OHM49_00745)	-	120656..121606 (-)	951	WP_024394700.1	S66 peptidase family protein	-
OHM49_RS00750 (OHM49_00750)	comYA	121692..122642 (+)	951	WP_014637312.1	competence type IV pilus ATPase ComGA	Machinery gene
OHM49_RS00755 (OHM49_00755)	comYB	122554..123591 (+)	1038	WP_043032925.1	competence type IV pilus assembly protein ComGB	Machinery gene
OHM49_RS00760 (OHM49_00760)	comYC	123593..123874 (+)	282	WP_011921720.1	competence type IV pilus major pilin ComGC	Machinery gene
OHM49_RS00765 (OHM49_00765)	comGD	123855..124262 (+)	408	WP_024394702.1	competence type IV pilus minor pilin ComGD	-
OHM49_RS00770 (OHM49_00770)	comYE	124234..124527 (+)	294	WP_024394703.1	competence type IV pilus minor pilin ComGE	Machinery gene
OHM49_RS00775 (OHM49_00775)	comGF/cglF	124514..124948 (+)	435	WP_029750050.1	competence type IV pilus minor pilin ComGF	Machinery gene
OHM49_RS00780 (OHM49_00780)	comGG	124926..125336 (+)	411	WP_024394705.1	competence type IV pilus minor pilin ComGG	-
OHM49_RS00785 (OHM49_00785)	comYH	125393..126346 (+)	954	WP_024394706.1	class I SAM-dependent methyltransferase	Machinery gene
OHM49_RS00790 (OHM49_00790)	-	126396..127583 (+)	1188	WP_014637319.1	acetate kinase	-
OHM49_RS00795 (OHM49_00795)	-	127898..128449 (+)	552	WP_014636756.1	folate family ECF transporter S component	-
OHM49_RS00800 (OHM49_00800)	-	128503..129759 (+)	1257	WP_024394707.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16507.85 Da
• Isoelectric Point: 8.8193

>NTDB_id=750971 OHM49_RS00775 WP_029750050.1 124514..124948(+) (comGF/cglF) [Streptococcus suis strain ID34572]
MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLIQEAHYQRQSVQKEWLVFSSQLRSEWDRSELVKVENGKVYVDKGG
QSLAFGKSRSDDFRKTNDRGQGYQPMLYQVDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=750971 OHM49_RS00775 WP_029750050.1 124514..124948(+) (comGF/cglF) [Streptococcus suis strain ID34572]
TTGTTAAAAAGTAAAATTCCCGCTTTTACTCTCCTGGAATGCTTGGTAGCCTTAGTCATCCTATCAGGAAGTCTTCTGGT
CTTTGAAGGCTTGTCAAAGTTGTTGATTCAAGAAGCACATTACCAACGTCAATCTGTCCAAAAGGAGTGGCTGGTATTTT
CTAGTCAGTTGCGGTCAGAGTGGGACCGGTCGGAATTGGTCAAGGTTGAAAATGGCAAGGTCTATGTTGATAAAGGTGGT
CAGTCGTTGGCCTTTGGTAAGTCACGATCGGATGATTTTCGGAAAACAAATGACAGGGGACAGGGCTACCAGCCCATGCT
CTATCAGGTGGACAGTGCAGCTATTTCCCAAGAAAACCAGCTGGTGCGTATCGACTTTAGCTTTAAAAACGGAGAGGAGC
GGACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (36-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	56.738	97.917	0.556
comGF/cglF	Streptococcus pneumoniae Rx1	56.738	97.917	0.556
comGF/cglF	Streptococcus pneumoniae D39	56.738	97.917	0.556
comGF/cglF	Streptococcus pneumoniae R6	56.738	97.917	0.556
comGF/cglF	Streptococcus mitis NCTC 12261	57.463	93.056	0.535
comGF/cglF	Streptococcus mitis SK321	54.478	93.056	0.507
comYF	Streptococcus mutans UA140	50.694	100	0.507
comYF	Streptococcus mutans UA159	50	100	0.5
comGF	Lactococcus lactis subsp. cremoris KW2	46.099	97.917	0.451