Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   OF800_RS09285 Genome accession   NZ_CP109636
Coordinates   1853871..1855118 (-) Length   415 a.a.
NCBI ID   WP_014025467.1    Uniprot ID   A0AA43PEA3
Organism   Lactococcus garvieae strain Alexii-6_2     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1848871..1860118
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OF800_RS10640 - 1850585..1851184 (-) 600 Protein_1809 PolC-type DNA polymerase III N-terminal domain-containing protein -
  OF800_RS09280 (OF800_09280) - 1851994..1853844 (-) 1851 WP_264308064.1 proline--tRNA ligase -
  OF800_RS09285 (OF800_09285) eeP 1853871..1855118 (-) 1248 WP_014025467.1 RIP metalloprotease RseP Regulator
  OF800_RS09290 (OF800_09290) - 1855294..1856088 (-) 795 WP_003133509.1 phosphatidate cytidylyltransferase -
  OF800_RS09295 (OF800_09295) - 1856085..1856822 (-) 738 WP_003133511.1 isoprenyl transferase -
  OF800_RS09300 (OF800_09300) yajC 1857023..1857358 (-) 336 WP_264308065.1 preprotein translocase subunit YajC -
  OF800_RS09305 (OF800_09305) - 1857433..1858080 (-) 648 WP_264308066.1 DNA alkylation repair protein -
  OF800_RS09310 (OF800_09310) rlmH 1858077..1858556 (-) 480 WP_264308067.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  OF800_RS09315 (OF800_09315) htrA 1858860..1860077 (+) 1218 WP_003133516.1 trypsin-like peptidase domain-containing protein Regulator

Sequence


Protein


Download         Length: 415 a.a.        Molecular weight: 45097.57 Da        Isoelectric Point: 5.8048

>NTDB_id=748706 OF800_RS09285 WP_014025467.1 1853871..1855118(-) (eeP) [Lactococcus garvieae strain Alexii-6_2]
MIQTLVTFIIVFGIIVVVHEYGHLFFAKRAGILVREFSIGMGPKIFAHQAKDGTFYSIRILPLGGYVRMAGWGDDTTEIK
KGTPASLMIVENQVVKINLSERVTLENSVPMLVTEYDFEEALFIEGEVFGEIKRYSVDHDATIIEADGTELRIAPRDVQY
QSASVLGKILTNFAGPLNNFILGIIAFIIITFMQGGVPSNTNQIGQVQSGTPAYSAGLQPKDKIQAVNGEKTGNWQEVVQ
RISANDGSEIKLDIERDGASKTLELKPEKIDGRYRIGITQTIKTGFLDKLTGGFTQAANAATLIFKALGNLIAQPSLDKL
GGPVAIYDLSGQAAREGLLSIIALLAMLSINLGIVNLIPIPVLDGGKIVLNIVEALRGKPLSQEKEGILTLVGLVFMVVL
MIAVTWNDILRAFIR

Nucleotide


Download         Length: 1248 bp        

>NTDB_id=748706 OF800_RS09285 WP_014025467.1 1853871..1855118(-) (eeP) [Lactococcus garvieae strain Alexii-6_2]
TTGATTCAAACATTGGTAACATTTATCATTGTCTTTGGTATTATTGTTGTTGTACATGAATATGGTCATCTGTTCTTTGC
CAAACGCGCGGGGATTTTAGTTCGCGAGTTTTCCATTGGAATGGGGCCCAAAATTTTTGCACATCAAGCCAAAGATGGCA
CATTTTATAGCATTCGTATACTTCCTCTTGGAGGTTATGTACGCATGGCGGGCTGGGGCGATGATACAACGGAAATAAAA
AAAGGGACCCCGGCATCTTTGATGATTGTTGAAAATCAGGTGGTTAAAATTAATCTTTCTGAACGGGTAACTTTGGAAAA
CAGTGTCCCCATGCTGGTCACTGAATACGATTTTGAAGAAGCTCTTTTCATTGAAGGGGAAGTTTTTGGTGAAATAAAAC
GTTATTCAGTTGACCATGACGCAACAATTATTGAAGCTGATGGAACGGAACTTCGTATCGCTCCACGAGATGTACAATAT
CAAAGTGCTAGCGTTCTCGGCAAAATTTTAACAAATTTTGCCGGCCCTTTAAATAACTTTATTTTAGGGATTATAGCTTT
TATTATCATCACTTTTATGCAAGGTGGTGTACCTTCTAATACAAATCAAATCGGACAAGTTCAATCGGGTACCCCTGCTT
ATTCGGCAGGTTTACAGCCAAAAGATAAAATCCAAGCAGTCAATGGCGAAAAAACGGGCAACTGGCAAGAAGTTGTCCAA
CGGATTAGTGCAAATGACGGCAGTGAAATCAAGCTGGATATTGAACGGGATGGCGCGTCGAAGACACTAGAGCTCAAACC
GGAAAAAATTGACGGAAGATATCGCATTGGTATCACTCAGACAATTAAAACGGGCTTTTTAGATAAACTAACGGGTGGCT
TTACCCAAGCTGCTAACGCAGCCACACTGATATTTAAAGCTTTAGGCAATCTTATAGCACAGCCAAGCCTTGATAAACTT
GGTGGTCCTGTCGCTATTTATGATTTAAGTGGACAAGCAGCCCGAGAAGGTCTATTATCCATCATCGCTTTACTTGCCAT
GCTCTCAATCAATCTGGGAATCGTCAATTTAATCCCAATTCCCGTCCTTGACGGAGGAAAAATCGTCCTCAATATTGTTG
AGGCCTTACGAGGCAAACCACTTTCACAAGAAAAAGAAGGAATTTTAACACTTGTGGGTCTTGTCTTTATGGTGGTTCTG
ATGATTGCTGTGACTTGGAATGATATTCTCCGAGCCTTTATTAGATAA

Domains


Predicted by InterproScan.

(7-400)

(204-256)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.325

100

0.569

  eeP Streptococcus thermophilus LMD-9

56.086

100

0.566