Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SAGCMC97051_RS04460 Genome accession   NZ_AP020310
Coordinates   795930..796739 (+) Length   269 a.a.
NCBI ID   WP_001289497.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain GCMC97051     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 790930..801739
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAGCMC97051_RS04430 (SAGCMC97051_07960) - 790933..791211 (+) 279 WP_001282887.1 hypothetical protein -
  SAGCMC97051_RS04435 (SAGCMC97051_07970) - 791223..791618 (+) 396 WP_000323826.1 replication initiator protein A -
  SAGCMC97051_RS04440 (SAGCMC97051_07980) - 791615..791929 (+) 315 WP_000583308.1 hypothetical protein -
  SAGCMC97051_RS04445 (SAGCMC97051_07990) - 792068..793393 (+) 1326 WP_000459145.1 ISLre2 family transposase -
  SAGCMC97051_RS04450 (SAGCMC97051_08000) vicR 793874..794584 (+) 711 WP_000722052.1 response regulator YycF Regulator
  SAGCMC97051_RS04455 (SAGCMC97051_08010) vicK 794577..795926 (+) 1350 WP_001065469.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SAGCMC97051_RS04460 (SAGCMC97051_08020) vicX 795930..796739 (+) 810 WP_001289497.1 MBL fold metallo-hydrolase Regulator
  SAGCMC97051_RS04465 (SAGCMC97051_08030) - 796742..797110 (+) 369 WP_000719384.1 YbaN family protein -
  SAGCMC97051_RS04470 (SAGCMC97051_08040) rnc 797286..797972 (+) 687 WP_000661526.1 ribonuclease III -
  SAGCMC97051_RS04475 (SAGCMC97051_08050) smc 797980..801519 (+) 3540 WP_000478794.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30243.22 Da        Isoelectric Point: 6.2265

>NTDB_id=74544 SAGCMC97051_RS04460 WP_001289497.1 795930..796739(+) (vicX) [Streptococcus agalactiae strain GCMC97051]
MSEIGFKYSILASGSTGNCFYIETPQKRLLIDAGLTGKKVTSLLAEINRKPEDLDAILVTHEHSDHIKGVGVLARKYHLD
IYANEQTWKVMDERNMLGKVDVSQKHVFGRGKTLTFGDLDIESFGVSHDAVDPQFYRMMKDDKSFVMLTDTGYVSDRMAG
LIENADGYLIESNHDIEILRSGSYPWTLKQRILSDKGHLSNEDGSETMIRTIGNRTKHIYLGHLSKENNIKELAHMTMEN
NLMRADFGVGTDFSVHDTSPDSATPLTRI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=74544 SAGCMC97051_RS04460 WP_001289497.1 795930..796739(+) (vicX) [Streptococcus agalactiae strain GCMC97051]
ATGTCAGAAATAGGATTTAAATATAGTATCTTAGCTTCAGGTTCAACTGGAAATTGTTTTTATATTGAGACACCCCAAAA
ACGTCTTTTAATTGACGCTGGTTTAACAGGCAAGAAAGTGACTAGCCTTCTTGCAGAAATTAATCGTAAACCAGAAGATT
TAGATGCTATACTAGTTACCCATGAACATTCTGACCACATTAAAGGTGTTGGCGTATTGGCTAGGAAATATCACCTTGAT
ATTTATGCCAATGAGCAGACGTGGAAAGTTATGGATGAGCGTAACATGTTAGGCAAAGTTGATGTTAGTCAAAAGCATGT
TTTTGGACGCGGTAAAACCTTAACTTTCGGGGATTTAGATATTGAGAGCTTTGGTGTAAGTCATGATGCTGTGGATCCCC
AATTTTACCGTATGATGAAAGATGATAAGAGCTTTGTGATGTTGACAGATACAGGATATGTTAGCGACCGAATGGCAGGC
TTGATTGAGAATGCAGATGGTTATTTGATCGAGTCAAATCACGACATTGAGATTCTACGTTCGGGTTCTTATCCTTGGAC
ACTTAAGCAACGTATTTTATCAGATAAAGGACATTTATCTAATGAAGATGGTTCAGAAACCATGATTCGCACTATAGGTA
ACCGTACTAAACACATCTATTTAGGACACTTGAGTAAGGAAAATAATATTAAGGAACTTGCTCACATGACTATGGAAAAC
AATTTAATGAGAGCTGACTTTGGTGTGGGCACAGATTTTTCTGTTCACGATACTTCACCTGATTCAGCTACCCCACTGAC
GAGGATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766

Multiple sequence alignment