Detailed information
Bioinformatically predicted
Overview
| Name | scnR | Type | Regulator |
| Locus tag | FVE75_RS10695 | Genome accession | NZ_AP019846 |
| Coordinates | 2242019..2242723 (-) | Length | 234 a.a. |
| NCBI ID | WP_147006408.1 | Uniprot ID | A0A510LEC9 |
| Organism | Leptotrichia hongkongensis strain JMUB5056 | ||
| Function | regulate comX expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2237019..2247723
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FVE75_RS10680 (JMUB5056_2226) | - | 2238303..2239541 (-) | 1239 | WP_147006405.1 | RluA family pseudouridine synthase | - |
| FVE75_RS10685 (JMUB5056_2227) | - | 2239887..2240546 (-) | 660 | WP_147006406.1 | thiamine diphosphokinase | - |
| FVE75_RS10690 (JMUB5056_2228) | - | 2240629..2241861 (-) | 1233 | WP_232052553.1 | sensor histidine kinase KdpD | - |
| FVE75_RS10695 (JMUB5056_2229) | scnR | 2242019..2242723 (-) | 705 | WP_147006408.1 | response regulator transcription factor | Regulator |
| FVE75_RS10700 (JMUB5056_2230) | - | 2242932..2243276 (+) | 345 | WP_147006478.1 | hypothetical protein | - |
| FVE75_RS10705 (JMUB5056_2231) | - | 2243425..2243919 (-) | 495 | WP_147006409.1 | HRDC domain-containing protein | - |
| FVE75_RS10710 (JMUB5056_2232) | pheT | 2243945..2246341 (-) | 2397 | WP_147006410.1 | phenylalanine--tRNA ligase subunit beta | - |
Sequence
Protein
Download Length: 234 a.a. Molecular weight: 26748.13 Da Isoelectric Point: 6.4889
>NTDB_id=74374 FVE75_RS10695 WP_147006408.1 2242019..2242723(-) (scnR) [Leptotrichia hongkongensis strain JMUB5056]
MIEKYLTNKCILIVDDEQEILDMTISILADYGYKNVQTAKSVKETMKCVEEKQPDLAILDVMLPDGNGFELLEKLRKASN
YPVLFLTARGEDEDKFKGFGLGADDYIVKPFLPKELLFRITAILRRTYKKESPIVNLNGCQIDFSRGEIIKDNKNISLTA
KEYELLQTLYRNAGRIVTIDTLCEAVWGENAYVYTNSLMTHIRRIREKIEINPSHPVSLITMKGLGYKLIVEGK
MIEKYLTNKCILIVDDEQEILDMTISILADYGYKNVQTAKSVKETMKCVEEKQPDLAILDVMLPDGNGFELLEKLRKASN
YPVLFLTARGEDEDKFKGFGLGADDYIVKPFLPKELLFRITAILRRTYKKESPIVNLNGCQIDFSRGEIIKDNKNISLTA
KEYELLQTLYRNAGRIVTIDTLCEAVWGENAYVYTNSLMTHIRRIREKIEINPSHPVSLITMKGLGYKLIVEGK
Nucleotide
Download Length: 705 bp
>NTDB_id=74374 FVE75_RS10695 WP_147006408.1 2242019..2242723(-) (scnR) [Leptotrichia hongkongensis strain JMUB5056]
ATGATTGAAAAATATTTGACAAATAAATGTATTTTAATTGTTGATGATGAGCAGGAAATTTTAGATATGACTATATCAAT
TTTAGCTGATTACGGGTATAAAAATGTACAGACTGCAAAAAGTGTGAAGGAAACTATGAAATGTGTTGAAGAAAAACAGC
CTGATTTAGCGATACTGGATGTTATGCTTCCAGATGGAAATGGTTTTGAATTGCTGGAAAAGTTGAGAAAAGCCAGTAAT
TATCCAGTATTATTTCTTACAGCACGTGGAGAAGATGAGGATAAATTCAAGGGCTTTGGATTAGGGGCGGATGACTACAT
TGTAAAGCCTTTTTTGCCAAAAGAACTTTTGTTTAGAATTACAGCAATTTTGCGGCGAACTTACAAAAAAGAAAGTCCAA
TTGTAAATTTAAATGGCTGTCAAATTGATTTTTCTCGTGGAGAAATTATAAAAGATAATAAAAATATATCATTAACTGCA
AAGGAATATGAATTATTACAGACTCTTTATCGAAACGCTGGACGTATTGTAACCATAGATACATTGTGTGAAGCTGTATG
GGGTGAAAATGCCTATGTTTATACAAATTCACTGATGACACATATAAGACGTATTAGAGAAAAAATTGAAATTAACCCTT
CCCATCCTGTGTCATTAATAACAATGAAAGGATTAGGCTACAAATTAATTGTGGAGGGAAAGTAA
ATGATTGAAAAATATTTGACAAATAAATGTATTTTAATTGTTGATGATGAGCAGGAAATTTTAGATATGACTATATCAAT
TTTAGCTGATTACGGGTATAAAAATGTACAGACTGCAAAAAGTGTGAAGGAAACTATGAAATGTGTTGAAGAAAAACAGC
CTGATTTAGCGATACTGGATGTTATGCTTCCAGATGGAAATGGTTTTGAATTGCTGGAAAAGTTGAGAAAAGCCAGTAAT
TATCCAGTATTATTTCTTACAGCACGTGGAGAAGATGAGGATAAATTCAAGGGCTTTGGATTAGGGGCGGATGACTACAT
TGTAAAGCCTTTTTTGCCAAAAGAACTTTTGTTTAGAATTACAGCAATTTTGCGGCGAACTTACAAAAAAGAAAGTCCAA
TTGTAAATTTAAATGGCTGTCAAATTGATTTTTCTCGTGGAGAAATTATAAAAGATAATAAAAATATATCATTAACTGCA
AAGGAATATGAATTATTACAGACTCTTTATCGAAACGCTGGACGTATTGTAACCATAGATACATTGTGTGAAGCTGTATG
GGGTGAAAATGCCTATGTTTATACAAATTCACTGATGACACATATAAGACGTATTAGAGAAAAAATTGAAATTAACCCTT
CCCATCCTGTGTCATTAATAACAATGAAAGGATTAGGCTACAAATTAATTGTGGAGGGAAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| scnR | Streptococcus mutans UA159 |
52.466 |
95.299 |
0.5 |
| vicR | Streptococcus mutans UA159 |
39.485 |
99.573 |
0.393 |
| micA | Streptococcus pneumoniae Cp1015 |
37.826 |
98.291 |
0.372 |