Detailed information NTG0074065

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: K6J91_RS14815
• Genome accession: NZ_AP024624
• Coordinates: 2801977..2802582 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain BEST3106
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2796977..2807582

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J91_RS14785 (BsBEST3106_28360)	-	2797790..2798179 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
K6J91_RS14790 (BsBEST3106_28370)	yajC	2798236..2798502 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
K6J91_RS14795 (BsBEST3106_28380)	tgt	2798539..2799684 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
K6J91_RS14800 (BsBEST3106_28390)	queA	2799711..2800739 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
K6J91_RS14805 (BsBEST3106_28400)	yrzS	2800769..2800969 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
K6J91_RS14810 (BsBEST3106_28410)	ruvB	2800962..2801966 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
K6J91_RS14815 (BsBEST3106_28420)	ruvA	2801977..2802582 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
K6J91_RS14820 (BsBEST3106_28430)	bofC	2802721..2803233 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
K6J91_RS14825 (BsBEST3106_28440)	csbX	2803281..2804588 (-)	1308	WP_003246197.1	MFS transporter	-
K6J91_RS14830 (BsBEST3106_28450)	iolG	2804659..2805684 (-)	1026	WP_004398990.1	inositol 2-dehydrogenase	-
K6J91_RS14835 (BsBEST3106_28460)	yrzF	2805922..2806569 (+)	648	WP_003246159.1	phosphotransferase	-
K6J91_RS14840 (BsBEST3106_28470)	-	2806615..2806737 (-)	123	WP_003229707.1	hypothetical protein	-
K6J91_RS14845 (BsBEST3106_28480)	-	2806717..2807112 (+)	396	WP_220096631.1	DUF5412 family protein	-
K6J91_RS14850 (BsBEST3106_28490)	-	2807119..2807259 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=74065 K6J91_RS14815 WP_003229717.1 2801977..2802582(-) (ruvA) [Bacillus subtilis strain BEST3106]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=74065 K6J91_RS14815 WP_003229717.1 2801977..2802582(-) (ruvA) [Bacillus subtilis strain BEST3106]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408