Detailed information NTG0740583

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: OEG79_RS13825
• Genome accession: NZ_CP107549
• Coordinates: 2901941..2904154 (-)
• Length: 737 a.a.
• NCBI ID: WP_264148722.1
• Uniprot ID: -
• Organism: Pseudomonas sp. Z8(2022)
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2896941..2909154

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OEG79_RS13790 (OEG79_13790)	murB	2897356..2898375 (-)	1020	WP_264145557.1	UDP-N-acetylmuramate dehydrogenase	-
OEG79_RS13795 (OEG79_13795)	-	2898372..2898836 (-)	465	WP_264145558.1	low molecular weight protein-tyrosine-phosphatase	-
OEG79_RS13800 (OEG79_13800)	kdsB	2898836..2899600 (-)	765	WP_264145559.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
OEG79_RS13805 (OEG79_13805)	-	2899601..2899786 (-)	186	WP_013714804.1	Trm112 family protein	-
OEG79_RS13810 (OEG79_13810)	lpxK	2899809..2900810 (-)	1002	WP_264145560.1	tetraacyldisaccharide 4'-kinase	-
OEG79_RS13815 (OEG79_13815)	-	2900811..2901239 (-)	429	WP_264145561.1	ExbD/TolR family protein	-
OEG79_RS13820 (OEG79_13820)	exbB	2901236..2901868 (-)	633	WP_264145562.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
OEG79_RS13825 (OEG79_13825)	comA	2901941..2904154 (-)	2214	WP_264148722.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
OEG79_RS13830 (OEG79_13830)	-	2904291..2904818 (+)	528	WP_264145563.1	DUF2062 domain-containing protein	-
OEG79_RS13835 (OEG79_13835)	-	2904856..2906100 (-)	1245	WP_264145564.1	lipoprotein-releasing ABC transporter permease subunit	-
OEG79_RS13840 (OEG79_13840)	lolD	2906100..2906786 (-)	687	WP_264148723.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
OEG79_RS13845 (OEG79_13845)	-	2906806..2908053 (-)	1248	WP_264145565.1	lipoprotein-releasing ABC transporter permease subunit	-
OEG79_RS13850 (OEG79_13850)	-	2908188..2908754 (+)	567	WP_264145566.1	PilZ domain-containing protein	-
OEG79_RS13855 (OEG79_13855)	-	2908774..2909082 (+)	309	WP_264145567.1	phosphodiesterase	-

Sequence

Protein

• Length: 737 a.a.
• Molecular weight: 80216.22 Da
• Isoelectric Point: 8.5204

>NTDB_id=740583 OEG79_RS13825 WP_264148722.1 2901941..2904154(-) (comA) [Pseudomonas sp. Z8(2022)]
MLALALGLLTLRFLPSLPPGWLLLIAAFTGLALLLSRLYPLGFFLLGLAWACNSAQWALDDRLDSRLDGRTLWLEGRVVG
LPEVSDGVVRFLLEEAHSRRAELPRRLLVAWYGGPAVQGGERWRLAVNLKRPHGLVNPQSFDYEAWLLAQRIGATGTVKS
GKRLAPATGLGSWRDSLRQQLLAVPAFHREGAIAALVLGDGSGLSTRDWRLLQHTGTVHLMVISGQHIGLLAGFLYGLVA
LLAKLGAWPARWPWLPCACVLALGGALVYGLLAGFEVPVRRACVMVALVLLWRLRFRHLGAWWPLLLALIVVLLLEPLAS
LQPGFWLSFSAVAILALVFGGRLGVWGWWRGLTRAQWTMAIGLLPMMLILGLPVSSSGPLANLIAVPWVGLVVVPLALLG
TLLLPVPVLGEGLLWLAGGALHLLFELLGIIADWLPAWLPSVLPLWAWLLAALGAQLLLLPAEVPLRLPGIALMLPALLL
PAPHMEEGRADVWVLDVGQGLAVLVRTREHALLYDAGPRFGDFDTGERIVLPSLRALNLRQLDLMLLSHADNDHAGGAAA
IKAGMPVSRVISGEPQRLADELGADSCESGLVWQWNEVDFRLWQWESAGSGNQLSCVLQVEAAGERLLLTGDIDVQAERA
LIQSDFPLASQWLLAPHHGSRTSSSQSFIDAVGAQNVLITRSRHNAFGHPHPQVLARYRAAGVEVHDTARDGALHLRLGE
HGAARALRHEPRFWREK

Nucleotide

• Length: 2214 bp

>NTDB_id=740583 OEG79_RS13825 WP_264148722.1 2901941..2904154(-) (comA) [Pseudomonas sp. Z8(2022)]
ATGTTGGCTCTGGCCTTGGGCCTGCTCACTTTGCGCTTTCTACCCAGCCTGCCGCCAGGCTGGCTGTTGCTGATCGCAGC
TTTTACCGGCCTGGCGTTGCTGCTCTCGCGCCTCTATCCACTGGGGTTCTTCTTGCTGGGACTGGCCTGGGCCTGCAACT
CGGCGCAGTGGGCGCTGGATGATCGCCTCGATTCTCGGCTCGATGGCCGCACGTTGTGGCTGGAGGGGCGGGTGGTCGGC
TTGCCCGAGGTATCCGATGGCGTGGTGCGCTTCCTGCTGGAGGAGGCGCACTCGCGTCGCGCAGAGTTGCCGAGAAGGTT
ACTCGTGGCCTGGTATGGCGGGCCGGCGGTGCAGGGCGGCGAGCGCTGGCGTCTGGCGGTCAACCTGAAACGTCCGCACG
GCCTGGTCAATCCGCAGAGCTTCGACTACGAAGCCTGGCTGCTGGCGCAGCGAATCGGCGCCACGGGCACGGTCAAATCC
GGAAAGCGCCTGGCGCCAGCCACGGGCCTGGGCAGTTGGCGCGACAGTCTGCGCCAGCAGTTGCTGGCCGTGCCGGCTTT
TCACAGAGAGGGCGCTATCGCCGCGCTGGTACTGGGAGACGGTTCGGGTTTGAGTACCCGTGACTGGCGCCTGCTGCAGC
ACACCGGCACGGTGCATCTGATGGTCATCTCGGGACAGCACATCGGGTTGCTGGCCGGTTTTCTCTACGGTCTGGTGGCA
TTGCTGGCAAAGCTCGGTGCATGGCCGGCGCGTTGGCCATGGTTGCCTTGTGCCTGCGTCCTGGCCCTGGGCGGAGCCTT
GGTCTACGGCTTGCTGGCAGGCTTCGAGGTGCCGGTGCGCAGAGCTTGCGTGATGGTCGCGCTGGTCCTGCTGTGGCGCC
TGCGCTTTCGTCACCTGGGCGCGTGGTGGCCATTGTTGCTGGCCTTGATCGTGGTTCTGCTGCTGGAGCCGCTGGCGTCA
TTGCAGCCGGGCTTCTGGCTGTCGTTTTCGGCGGTGGCGATTCTGGCTCTGGTGTTTGGCGGTCGGCTCGGCGTCTGGGG
TTGGTGGCGCGGTCTGACGCGTGCGCAGTGGACCATGGCCATCGGCCTGTTGCCGATGATGTTGATCCTTGGCCTGCCAG
TCAGCAGCAGCGGCCCGCTGGCCAACCTGATCGCCGTACCCTGGGTCGGCTTGGTTGTGGTGCCCCTGGCCTTGCTGGGC
ACATTGCTGCTGCCTGTTCCCGTGCTGGGTGAGGGGCTGTTGTGGCTGGCCGGTGGGGCATTGCACCTGCTGTTCGAATT
GCTCGGCATCATCGCCGACTGGCTGCCCGCCTGGTTGCCGAGCGTCCTGCCGCTATGGGCCTGGCTACTGGCTGCGCTGG
GGGCGCAGCTGCTTCTGTTGCCAGCCGAGGTACCCCTGCGTCTGCCCGGTATTGCGCTGATGCTGCCCGCCTTGCTGTTG
CCTGCACCGCATATGGAGGAGGGGCGCGCCGATGTCTGGGTGCTGGATGTAGGCCAGGGGCTGGCAGTGCTGGTACGCAC
CCGGGAGCACGCCCTGTTGTACGACGCTGGGCCGCGCTTCGGTGACTTCGATACCGGTGAGCGTATCGTCCTGCCTTCGT
TGCGGGCGCTTAACCTGCGGCAGCTCGACCTGATGCTGCTCAGCCATGCGGACAACGATCATGCTGGCGGCGCTGCGGCC
ATCAAGGCCGGGATGCCTGTCTCAAGGGTGATCAGCGGTGAGCCGCAACGACTGGCCGATGAGCTTGGCGCCGACTCCTG
CGAGTCGGGGCTGGTCTGGCAATGGAACGAGGTGGACTTCCGGTTGTGGCAGTGGGAGAGCGCCGGTAGCGGCAACCAGC
TGTCCTGCGTTCTGCAGGTCGAGGCTGCGGGCGAGCGTCTGCTGTTGACCGGCGATATCGACGTACAGGCCGAGCGGGCC
CTGATTCAGTCCGACTTTCCTCTGGCGTCGCAGTGGCTGCTGGCGCCCCATCACGGCAGTCGTACCTCGTCCAGCCAGTC
GTTCATCGATGCAGTCGGAGCGCAGAATGTGCTGATCACCCGCAGTCGCCACAATGCCTTCGGCCATCCTCATCCACAGG
TGCTGGCGCGTTATCGGGCTGCGGGTGTCGAGGTACACGACACCGCGCGCGACGGTGCCCTGCATCTGCGCCTGGGTGAG
CATGGCGCAGCGCGGGCGTTGCGACACGAACCACGTTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (496-673)

• Domain of unknown function (DUF4131) (DUF4131) (19-163)

• Competence protein (Competence) (196-461)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	67.827	97.422	0.661
comA	Ralstonia pseudosolanacearum GMI1000	36.306	100	0.387