Detailed information NTG0740522

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: OE648_RS06060
• Genome accession: NZ_CP107544
• Coordinates: 1319997..1322231 (+)
• Length: 744 a.a.
• NCBI ID: WP_333715697.1
• Uniprot ID: -
• Organism: Pseudomonas moraviensis strain EFBE32
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1314997..1327231

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OE648_RS06035 (OE648_06035)	-	1316035..1316694 (+)	660	WP_064361446.1	transglutaminase-like domain-containing protein	-
OE648_RS06040 (OE648_06040)	-	1316738..1317361 (+)	624	WP_042610684.1	glutathione S-transferase family protein	-
OE648_RS06045 (OE648_06045)	-	1317495..1318427 (+)	933	WP_042610685.1	ABC transporter ATP-binding protein	-
OE648_RS06050 (OE648_06050)	-	1318424..1319203 (+)	780	WP_039760202.1	ABC transporter permease	-
OE648_RS06055 (OE648_06055)	-	1319342..1319860 (-)	519	WP_083352201.1	DUF2062 domain-containing protein	-
OE648_RS06060 (OE648_06060)	comA	1319997..1322231 (+)	2235	WP_333715697.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
OE648_RS06065 (OE648_06065)	exbB	1322333..1322968 (+)	636	WP_038364506.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
OE648_RS06070 (OE648_06070)	-	1322965..1323393 (+)	429	WP_042610688.1	ExbD/TolR family protein	-
OE648_RS06075 (OE648_06075)	lpxK	1323393..1324403 (+)	1011	WP_333715698.1	tetraacyldisaccharide 4'-kinase	-
OE648_RS06080 (OE648_06080)	-	1324428..1324613 (+)	186	WP_003179363.1	Trm112 family protein	-
OE648_RS06085 (OE648_06085)	kdsB	1324610..1325374 (+)	765	WP_065616818.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
OE648_RS06090 (OE648_06090)	-	1325374..1325838 (+)	465	WP_064361450.1	low molecular weight protein-tyrosine-phosphatase	-
OE648_RS06095 (OE648_06095)	murB	1325835..1326854 (+)	1020	WP_333715699.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 744 a.a.
• Molecular weight: 81972.34 Da
• Isoelectric Point: 9.7736

>NTDB_id=740522 OE648_RS06060 WP_333715697.1 1319997..1322231(+) (comA) [Pseudomonas moraviensis strain EFBE32]
MRTGMMALAVGLLAPVFLPALPPVGWWVVLPMVALMLLPFRSYPLAFLLFGFTWACVGAQMALNDRLPPRLDGETRWLEG
RVVGLPQHGDGVVRFELADARSRHEKLPSLMRLAWYAGPPVNSGERWRLAVKLKRPGGLLNPNAFDYEAWLLAQRIGAIG
TIKDGQRLAEARYAWRDSVRQRLLAVDAQGREGALAALVLGAGSGLSREDWQVLQDTGTVHLLVISGQHIGLLAAVMYLL
VAGLARYGLWPLRWPWLPWACGLAFAAALGYGLLAGFDVPVQRACVMVALVLLWRLRFRHLGAWWPLLLAFNGVLLFDPL
ASLRPGFWLSFAAVAVLIFTFGGRLGAWRWWQTWTRAQWLIAIGLCPVLLALSLPISVSGPVANLVAVPWVSLVVLPPAL
LGTLLLPVPYIGEGLLWLAGGLIDWLFIGLALIAGQWPAWIPAAIPLWALVLGSLGILLLLLPRGVLLRPLGWPLMLLLI
LPPRERIEEGRADVWQLDVGQGLAILVRTRHHALLYDAGPRFGEFDLGERVVLPALRKLNVQTLDLMLLSHADADHAGGA
GAVMRGLDVHRIVSGDPPNLPPELSAEACASGEQWQWEGVQFQLWQWSAADDSNQRSCVLQIEANGERLLLTGDIDIHAE
RVLLDSPLAVPTQWLQSPHHGSRSSSSMALLKALQPEAVLISRGHGNSFGHPHPTVLARYRKQGLRIYDSAEQGAIHLQL
GSFKPPWTMRHQRRFWREPPAPGR

Nucleotide

• Length: 2235 bp

>NTDB_id=740522 OE648_RS06060 WP_333715697.1 1319997..1322231(+) (comA) [Pseudomonas moraviensis strain EFBE32]
ATGCGCACAGGGATGATGGCGCTGGCAGTCGGTCTGCTGGCCCCGGTTTTTTTGCCGGCCTTGCCGCCGGTCGGTTGGTG
GGTGGTACTGCCGATGGTGGCGCTGATGCTCCTACCGTTTCGCAGCTATCCACTGGCATTTTTGTTGTTTGGCTTCACAT
GGGCCTGCGTCGGCGCGCAGATGGCTCTGAATGACCGCTTGCCGCCGCGACTGGACGGCGAAACCCGTTGGCTCGAAGGG
CGCGTGGTCGGCTTGCCGCAGCACGGCGACGGCGTGGTGCGTTTCGAACTGGCTGACGCCCGCTCGCGCCACGAAAAGCT
GCCATCGCTGATGCGCCTGGCCTGGTACGCCGGGCCGCCGGTCAACAGCGGCGAACGCTGGCGTCTGGCGGTGAAGTTGA
AGCGCCCGGGTGGCTTGCTCAACCCGAACGCCTTCGATTACGAGGCCTGGCTGCTCGCCCAGCGCATCGGTGCGATCGGT
ACGATCAAGGATGGCCAGCGTCTGGCTGAGGCCCGGTACGCCTGGCGCGACAGCGTTCGTCAGCGCCTGCTGGCGGTCGA
TGCGCAGGGGCGAGAGGGCGCGTTGGCGGCGCTGGTGCTCGGCGCCGGTTCGGGTCTGAGTCGCGAGGACTGGCAGGTAC
TGCAAGACACCGGCACCGTGCATTTGCTGGTGATTTCCGGCCAGCACATCGGCTTGCTCGCCGCGGTGATGTATCTGCTG
GTCGCCGGGCTTGCGCGATACGGTTTGTGGCCGTTGCGCTGGCCATGGCTGCCCTGGGCATGCGGCCTGGCCTTCGCGGC
GGCGCTGGGTTATGGCTTGCTCGCCGGTTTCGATGTGCCGGTGCAGCGCGCCTGCGTGATGGTGGCGCTGGTGCTGTTGT
GGCGCCTGCGTTTTCGCCATCTCGGTGCGTGGTGGCCGTTGTTGCTGGCGTTCAACGGCGTGCTGCTGTTTGATCCGCTG
GCCAGTTTGCGTCCCGGGTTCTGGCTGTCTTTCGCGGCGGTGGCGGTACTGATTTTCACCTTCGGCGGGCGGCTGGGCGC
TTGGCGCTGGTGGCAGACCTGGACCCGCGCGCAGTGGCTGATCGCGATTGGCTTGTGTCCGGTGTTGCTGGCGCTCAGCC
TGCCGATCAGCGTCAGTGGCCCCGTGGCGAATCTGGTGGCGGTGCCGTGGGTCAGTCTTGTGGTATTGCCGCCGGCGTTG
CTCGGCACGCTATTGCTGCCCGTGCCTTATATTGGCGAAGGGTTGTTGTGGCTGGCCGGTGGTTTGATCGACTGGCTGTT
TATCGGACTGGCGCTGATTGCCGGGCAATGGCCAGCGTGGATACCCGCCGCCATTCCATTGTGGGCGCTGGTCTTGGGCA
GCCTCGGCATCTTGTTATTGCTGTTGCCCCGTGGTGTGCTGCTACGGCCATTGGGCTGGCCGCTAATGCTGCTGCTGATA
TTGCCGCCGCGAGAGCGAATAGAAGAGGGGCGGGCCGATGTCTGGCAACTCGACGTCGGCCAAGGCCTGGCCATCCTCGT
GCGCACCCGCCATCACGCGTTGCTCTATGACGCCGGGCCGCGTTTTGGCGAGTTCGATCTCGGCGAGCGGGTGGTGCTGC
CAGCGCTGCGCAAACTCAATGTGCAAACGCTCGACCTGATGCTGCTCAGCCATGCCGACGCCGATCACGCTGGCGGCGCC
GGGGCGGTGATGCGTGGATTGGACGTGCACCGCATCGTCAGTGGCGACCCGCCAAACCTGCCGCCGGAGTTGAGCGCCGA
AGCCTGCGCAAGTGGCGAACAGTGGCAATGGGAGGGCGTGCAGTTCCAGCTCTGGCAATGGTCGGCGGCCGATGACAGCA
ACCAGCGCTCCTGTGTCTTGCAGATCGAAGCCAACGGCGAGCGCCTGCTGCTCACCGGCGACATCGACATTCACGCCGAG
CGCGTTCTGCTCGACAGTCCACTGGCGGTGCCGACGCAGTGGCTGCAATCGCCGCATCACGGCAGTCGCAGCTCATCGTC
GATGGCCCTGCTCAAAGCCTTGCAGCCAGAAGCGGTGCTGATCTCCCGTGGCCACGGCAACTCCTTCGGTCACCCGCATC
CGACCGTGCTTGCGCGCTACCGCAAGCAAGGCCTGCGCATCTATGACAGCGCCGAGCAGGGCGCCATCCATCTGCAACTG
GGCAGCTTCAAACCGCCGTGGACGATGCGTCACCAACGGCGTTTCTGGCGCGAGCCGCCGGCGCCTGGCCGTTGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (23-167)

• Competence protein (Competence) (198-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-685)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	62.448	96.64	0.603
comA	Ralstonia pseudosolanacearum GMI1000	34.961	100	0.366