Detailed information NTG0740517

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: OE648_RS02910
• Genome accession: NZ_CP107544
• Coordinates: 606682..607554 (-)
• Length: 290 a.a.
• NCBI ID: WP_065615666.1
• Uniprot ID: -
• Organism: Pseudomonas moraviensis strain EFBE32
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 601682..612554

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OE648_RS02875 (OE648_02865)	-	602199..603497 (-)	1299	WP_333715331.1	NAD(P)/FAD-dependent oxidoreductase	-
OE648_RS02880 (OE648_02870)	-	603561..603734 (-)	174	WP_007909875.1	DUF3094 domain-containing protein	-
OE648_RS02885 (OE648_02875)	-	603786..604313 (-)	528	WP_064364122.1	MOSC domain-containing protein	-
OE648_RS02890 (OE648_02880)	-	604310..604936 (-)	627	WP_007909887.1	DUF1780 domain-containing protein	-
OE648_RS02895 (OE648_02885)	-	605126..605815 (+)	690	WP_065615664.1	energy-coupling factor ABC transporter permease	-
OE648_RS02900 (OE648_02890)	yacG	605865..606065 (-)	201	WP_042610482.1	DNA gyrase inhibitor YacG	-
OE648_RS02905 (OE648_02895)	coaE	606062..606685 (-)	624	WP_042610481.1	dephospho-CoA kinase	-
OE648_RS02910 (OE648_02900)	pilD	606682..607554 (-)	873	WP_065615666.1	prepilin peptidase	Machinery gene
OE648_RS02915 (OE648_02905)	pilC	607556..608773 (-)	1218	WP_065615667.1	type II secretion system F family protein	Machinery gene
OE648_RS02920 (OE648_02910)	pilB	608776..610476 (-)	1701	WP_042610478.1	type IV-A pilus assembly ATPase PilB	Machinery gene
OE648_RS02925 (OE648_02915)	-	610703..611140 (+)	438	WP_064364126.1	pilin	-
OE648_RS02930 (OE648_02920)	-	611441..611794 (+)	354	WP_064364127.1	BON domain-containing protein	-
OE648_RS02935 (OE648_02925)	-	612062..612361 (-)	300	WP_064364128.1	DUF2845 domain-containing protein	-

Sequence

Protein

• Length: 290 a.a.
• Molecular weight: 31895.13 Da
• Isoelectric Point: 7.0620

>NTDB_id=740517 OE648_RS02910 WP_065615666.1 606682..607554(-) (pilD) [Pseudomonas moraviensis strain EFBE32]
MPIDELFAVYPLAFVLTALLLGLVVGSFLNVVVWRLPKMLERDWRQQAHDVLGLPIETPAPTYNLMLPHSACPHCGHRIR
PWENIPLLSYLVLRGCCSACSAPISRRYPLTELACGLLSAFIAWHLGFGWPAGLLILLTWGLLAMSLIDCEHQLLPDVLV
LPLLWLGLIVNSFGVFVPLSDALWGAVAGYLALWSVFWLFKLLTGKDGIGHGDFKLLALLGAWGGWQVLPLTILLSSLVG
AILGVVMLRLRAQETSTPIPFGPFLAIAGWIALLWGGQITDFYWQSVGLK

Nucleotide

• Length: 873 bp

>NTDB_id=740517 OE648_RS02910 WP_065615666.1 606682..607554(-) (pilD) [Pseudomonas moraviensis strain EFBE32]
ATGCCTATCGACGAACTGTTTGCCGTGTACCCGCTGGCCTTTGTGCTCACCGCGCTGCTGCTTGGTCTGGTGGTCGGCAG
CTTCCTCAATGTTGTGGTCTGGCGTCTGCCGAAAATGCTCGAGCGCGACTGGCGCCAGCAGGCCCATGATGTGCTCGGCC
TGCCCATTGAAACACCTGCGCCGACCTACAACCTGATGCTGCCGCATTCCGCGTGCCCGCATTGCGGACACCGGATCCGC
CCTTGGGAAAATATTCCGCTGCTCAGTTATCTGGTGCTGCGCGGGTGCTGCTCGGCCTGCTCGGCACCGATCAGCAGACG
TTACCCGCTGACCGAGCTGGCCTGCGGCCTGCTCTCGGCCTTCATCGCCTGGCACCTTGGCTTCGGCTGGCCGGCGGGTC
TGCTGATCTTGCTGACGTGGGGCTTGCTGGCGATGAGCCTGATCGACTGCGAGCATCAACTGCTGCCCGATGTGCTGGTG
CTGCCGTTGCTGTGGCTGGGGCTGATCGTCAACAGCTTCGGCGTATTCGTGCCGTTGTCCGATGCGCTGTGGGGCGCGGT
CGCGGGTTATCTGGCGCTGTGGTCGGTGTTCTGGCTGTTCAAGTTACTCACCGGCAAGGACGGCATCGGCCATGGCGATT
TCAAGCTGCTGGCCTTGCTCGGTGCATGGGGTGGCTGGCAGGTTCTGCCGCTGACCATTCTGTTGTCATCGCTGGTGGGG
GCGATTTTGGGCGTCGTCATGCTGCGTCTGCGCGCTCAGGAAACCTCGACGCCGATCCCGTTCGGGCCCTTTCTGGCAAT
TGCCGGCTGGATTGCCTTGCTCTGGGGTGGTCAAATAACCGACTTCTATTGGCAGTCTGTCGGTTTGAAATGA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (20-125)

• Type IV leader peptidase family (Peptidase_A24) (137-245)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Vibrio cholerae strain A1552	54.577	97.931	0.534
pilD	Vibrio campbellii strain DS40M4	52.632	98.276	0.517
pilD	Neisseria gonorrhoeae MS11	46.341	98.966	0.459
pilD	Acinetobacter baumannii D1279779	47.445	94.483	0.448
pilD	Acinetobacter nosocomialis M2	47.445	94.483	0.448