Detailed information NTG0740515

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: OE648_RS02815
• Genome accession: NZ_CP107544
• Coordinates: 590623..591969 (-)
• Length: 448 a.a.
• NCBI ID: WP_064364117.1
• Uniprot ID: -
• Organism: Pseudomonas moraviensis strain EFBE32
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 585623..596969

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OE648_RS02800 (OE648_02790)	-	585869..588958 (+)	3090	WP_333715328.1	pilus assembly protein	-
OE648_RS02805 (OE648_02795)	-	588974..589375 (+)	402	WP_042610493.1	type IV pilin protein	-
OE648_RS02810 (OE648_02800)	thiO	589434..590534 (+)	1101	WP_116658389.1	glycine oxidase ThiO	-
OE648_RS02815 (OE648_02805)	pilR	590623..591969 (-)	1347	WP_064364117.1	sigma-54-dependent transcriptional regulator	Regulator
OE648_RS02820 (OE648_02810)	pilS	591966..593555 (-)	1590	WP_042610490.1	sensor histidine kinase	Regulator
OE648_RS02825 (OE648_02815)	-	593545..593778 (-)	234	WP_039761661.1	PP0621 family protein	-
OE648_RS02830 (OE648_02820)	-	593905..594921 (-)	1017	WP_064364119.1	outer membrane protein assembly factor BamD	-
OE648_RS02835 (OE648_02825)	rluD	595073..596035 (+)	963	WP_042610487.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
OE648_RS02840 (OE648_02830)	pgeF	596032..596754 (+)	723	WP_065615660.1	peptidoglycan editing factor PgeF	-

Sequence

Protein

• Length: 448 a.a.
• Molecular weight: 50112.49 Da
• Isoelectric Point: 6.5117

>NTDB_id=740515 OE648_RS02815 WP_064364117.1 590623..591969(-) (pilR) [Pseudomonas moraviensis strain EFBE32]
MNTSPRQKILIVDDEPDIRELLEITLGRMKLETFSARNLGEAQALLQREHFDLCLTDMRLPDGTGLELVQHIQQRAPHLP
VAMITAYGSLETAINALKAGAFDFLTKPVELPRLRELVSSALRMPTAGGLSTAIERRLLGDSPPMANLRKQIDKLARSQA
PVYISGESGSGKELVARLIHEQGPRASQPFVPVNCGAIPSELMESEFFGHRKGSFTGAVEDKPGLFQAAHGGTLFLDEVA
DLPLPMQVKLLRAIQEKAVRSIGGQQETVVDVRILCATHKDLEAEVAAERFRQDLYYRLNVIELRVPSLRERRDDIEALA
MHVLKRLAKDTGQPEARLHPQALEALKNYRFPGNVRELENVLERAHTLCEQRTIEAQDLRLSEGNCAADGATADLTQIDN
LEDYLESVERKLILQALEETRWNRTAAAQRLSLSFRSMRYRLKKLGLD

Nucleotide

• Length: 1347 bp

>NTDB_id=740515 OE648_RS02815 WP_064364117.1 590623..591969(-) (pilR) [Pseudomonas moraviensis strain EFBE32]
TTGAATACAAGCCCACGGCAAAAAATTCTTATCGTCGACGACGAACCGGATATCCGCGAGCTCCTGGAAATCACCCTGGG
ACGGATGAAACTCGAGACCTTCAGCGCGCGCAACCTGGGCGAGGCTCAGGCGCTGTTACAGCGCGAGCACTTTGACCTGT
GCCTGACCGACATGCGCCTGCCCGACGGCACCGGGCTGGAGCTGGTACAACACATCCAGCAGCGCGCTCCGCATCTGCCG
GTGGCGATGATCACCGCGTACGGAAGCCTGGAAACGGCTATCAATGCGCTGAAGGCCGGCGCGTTCGATTTCCTCACCAA
ACCAGTGGAGCTGCCGCGACTGCGCGAGCTGGTCAGCTCGGCGCTGCGCATGCCGACAGCCGGTGGCCTGAGTACGGCAA
TCGAGCGACGCTTGCTGGGCGACTCGCCGCCGATGGCCAATCTGCGCAAGCAGATCGACAAGCTCGCGCGCAGCCAGGCG
CCGGTGTACATCAGCGGTGAATCCGGCAGCGGCAAAGAACTGGTCGCGCGCCTGATTCACGAACAAGGCCCGCGCGCCAG
TCAGCCCTTTGTGCCGGTGAACTGCGGGGCGATTCCGTCGGAGCTGATGGAAAGCGAATTCTTCGGCCACCGCAAAGGCA
GTTTCACCGGTGCCGTCGAAGACAAGCCGGGGCTGTTCCAGGCGGCCCATGGCGGCACTCTGTTTCTCGATGAAGTTGCC
GATCTGCCACTGCCGATGCAGGTGAAACTGCTGCGGGCGATTCAGGAAAAAGCCGTGCGCAGCATCGGCGGCCAGCAGGA
AACGGTGGTCGACGTGCGCATCCTGTGCGCCACACACAAAGACCTTGAAGCCGAAGTCGCGGCCGAGCGCTTCCGTCAGG
ATCTGTATTACCGGCTCAACGTCATTGAACTGCGCGTGCCCTCCCTGCGAGAACGTCGCGACGACATCGAGGCGCTCGCC
ATGCATGTGCTCAAGCGTCTGGCCAAGGACACTGGACAACCCGAAGCGCGCCTGCATCCGCAAGCGCTGGAGGCGCTGAA
GAACTATCGCTTTCCCGGCAACGTGCGCGAACTGGAGAATGTCCTCGAACGCGCGCACACCTTGTGTGAACAGCGCACGA
TCGAAGCGCAGGATCTGCGTTTGAGCGAAGGAAATTGCGCCGCGGATGGGGCGACGGCTGATCTGACGCAGATCGACAAT
CTCGAGGATTATCTGGAGAGCGTCGAGCGCAAACTCATTCTGCAGGCGCTGGAGGAAACCCGCTGGAACCGCACGGCGGC
GGCGCAGCGGTTGAGTCTGTCGTTTCGGTCGATGCGTTATCGGCTGAAGAAGTTGGGTCTGGACTAG

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (9-118)

• Sigma-54 interaction domain (Sigma54_activat) (139-304)

• Bacterial regulatory protein, Fis family (HTH_8) (405-445)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	78.104	98.884	0.772
pilR	Acinetobacter baumannii strain A118	48.802	100	0.5