Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   QAY59_RS03300 Genome accession   NZ_CP122487
Coordinates   640194..642254 (+) Length   686 a.a.
NCBI ID   WP_001151517.1    Uniprot ID   Q8NX11
Organism   Staphylococcus aureus strain IT-MRSA45     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 635194..647254
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAY59_RS03275 (QAY59_03270) rpe 635665..636309 (+) 645 WP_000164332.1 ribulose-phosphate 3-epimerase -
  QAY59_RS03280 (QAY59_03275) - 636316..636957 (+) 642 WP_000547905.1 thiamine diphosphokinase -
  QAY59_RS03285 (QAY59_03280) rpmB 637338..637526 (-) 189 WP_000517908.1 50S ribosomal protein L28 -
  QAY59_RS03290 (QAY59_03285) - 637969..638343 (+) 375 WP_000171418.1 Asp23/Gls24 family envelope stress response protein -
  QAY59_RS03295 (QAY59_03290) fakA 638358..640004 (+) 1647 WP_000623901.1 fatty acid kinase catalytic subunit FakA -
  QAY59_RS03300 (QAY59_03295) recG 640194..642254 (+) 2061 WP_001151517.1 ATP-dependent DNA helicase RecG Machinery gene
  QAY59_RS03305 (QAY59_03300) fapR 642457..643029 (+) 573 WP_001548538.1 transcription factor FapR -
  QAY59_RS03310 (QAY59_03305) plsX 643034..644020 (+) 987 WP_000239748.1 phosphate acyltransferase PlsX -
  QAY59_RS03315 (QAY59_03310) fabD 644013..644939 (+) 927 WP_000047343.1 ACP S-malonyltransferase -
  QAY59_RS03320 (QAY59_03315) fabG 644932..645666 (+) 735 WP_000167269.1 3-oxoacyl-[acyl-carrier-protein] reductase -
  QAY59_RS03325 (QAY59_03320) - 646036..646269 (+) 234 WP_000426914.1 acyl carrier protein -
  QAY59_RS03330 (QAY59_03325) rnc 646385..647116 (+) 732 WP_000043237.1 ribonuclease III -

Sequence

Protein


Download         Length: 686 a.a.        Molecular weight: 78271.79 Da        Isoelectric Point: 6.1557

>NTDB_id=740116 QAY59_RS03300 WP_001151517.1 640194..642254(+) (recG) [Staphylococcus aureus strain IT-MRSA45]
MAKVNLIESPYSLLQLKGIGPKKIEVLQQLNIHTVEDLVLYLPTRYEDNTVIDLNQAEDQSNVTIEGQVYTAPVVAFFGR
NNSKLTVHLMVNNIAVKCIFFNQPYLKKKIELNQTITVKGKWNRVKQEITGNRVFFNSQGTQTQENADVQLEPVYRIKEG
IKQKQIRDQIRQALNDVTIHEWLTDELREKYKLETLDFTLNTLHHPKSKEDLLRARRTYAFTELFLFELRMQWLNRLEKS
SDEAIEIDYGLDQVKSFIDRLPFELTEAQKSSVNEIFRDLKAPIRMHRLLQGDVGSGKTVVAAICMYALKTAGYQSALMV
PTEILAEQHAESLMALFGDSMNVALLTGSVKGKKRKILLEQLENGTIDCLIGTHALIQDDVIFHNVGLVITDEQHRFGVN
QRQLLREKGAMTNVLFMTATPIPRTLAISVFGEMDVSSIKQLPKGRKPIITTWAKHEQYDKVLMQMTSELKKGRQAYVIC
PLIESSEHLEDVQNVVALYESLQQYYGVSRVGLLHGKLSADEKDEVMQKFSNHEIDVLVSTTVVEVGVNVPNATFMMIYD
ADRFGLSTLHQLRGRVGRSDQQSYCVLIASPKTETGIERMTIMTQTTDGFELSERDLEMRGPGDFFGVKQSGLPDFLVAN
LVEDYRMLEVARDEAAELIQSGVFFENTYQHLRHFVEENLLHRSFD

Nucleotide


Download         Length: 2061 bp        

>NTDB_id=740116 QAY59_RS03300 WP_001151517.1 640194..642254(+) (recG) [Staphylococcus aureus strain IT-MRSA45]
TTGGCTAAAGTAAACTTAATAGAAAGTCCATATTCTCTTTTACAATTAAAAGGTATAGGTCCTAAGAAAATAGAAGTATT
GCAACAACTAAATATTCATACAGTGGAAGATCTTGTTCTTTATTTGCCAACTAGATATGAAGATAATACAGTGATTGATT
TGAATCAAGCAGAAGATCAATCTAACGTTACGATAGAAGGACAAGTATATACAGCTCCAGTAGTTGCATTTTTTGGAAGA
AATAATTCAAAATTAACCGTTCATTTAATGGTAAATAATATTGCTGTCAAATGTATTTTTTTCAATCAACCGTATTTAAA
AAAGAAAATCGAATTAAATCAAACTATAACTGTTAAAGGTAAGTGGAATAGAGTTAAACAGGAAATTACTGGTAATAGGG
TTTTCTTTAATTCACAAGGGACACAAACTCAAGAAAACGCAGATGTTCAATTAGAACCAGTCTATCGTATTAAGGAAGGT
ATTAAACAAAAGCAAATACGAGACCAAATTAGACAAGCGTTAAATGATGTGACAATTCATGAATGGTTAACTGATGAACT
AAGAGAAAAATATAAATTAGAGACCTTGGACTTTACTTTGAACACATTACATCATCCTAAAAGTAAAGAGGATTTATTAC
GTGCTCGTAGAACCTATGCATTTACTGAACTGTTTTTATTCGAATTACGTATGCAATGGCTAAATAGATTAGAAAAGTCA
TCTGACGAAGCAATTGAAATTGATTATGGCTTAGACCAAGTTAAATCATTTATTGATCGTTTACCTTTTGAACTAACTGA
AGCACAGAAATCCAGTGTTAATGAAATTTTTAGAGATTTAAAAGCACCAATACGTATGCATCGATTACTTCAAGGTGATG
TAGGTTCAGGAAAAACAGTAGTTGCTGCAATTTGTATGTATGCGTTAAAAACGGCTGGTTATCAATCAGCATTGATGGTA
CCAACTGAAATTTTAGCAGAGCAACATGCTGAAAGTTTAATGGCTTTATTTGGAGATTCTATGAACGTTGCATTGTTAAC
TGGGTCAGTAAAAGGTAAGAAACGAAAGATACTTTTAGAACAACTTGAAAATGGTACGATTGATTGTTTAATTGGAACCC
ATGCTTTGATTCAAGATGATGTGATTTTCCATAATGTTGGTTTAGTAATTACAGATGAACAACATCGATTTGGTGTGAAT
CAACGCCAGCTTTTAAGAGAAAAAGGTGCAATGACGAATGTGTTATTTATGACAGCAACCCCGATACCAAGAACACTAGC
AATATCAGTTTTTGGTGAGATGGATGTGTCTTCAATTAAACAATTACCAAAAGGTCGTAAACCTATCATTACTACTTGGG
CAAAGCATGAGCAATACGATAAAGTTTTGATGCAAATGACCTCAGAGTTGAAAAAAGGTCGTCAAGCATATGTCATTTGC
CCGCTAATAGAAAGTTCTGAGCATCTCGAAGATGTTCAAAATGTTGTCGCATTGTACGAGTCTTTACAACAGTATTATGG
TGTTTCCCGTGTAGGGTTATTGCATGGTAAGTTATCTGCCGATGAAAAAGATGAGGTCATGCAAAAGTTTAGTAATCATG
AGATAGATGTTTTAGTTTCTACTACTGTTGTTGAAGTAGGTGTTAATGTACCGAATGCAACTTTTATGATGATTTATGAT
GCGGATCGCTTTGGATTATCAACTTTACATCAGTTACGCGGTCGTGTAGGTAGAAGTGACCAGCAAAGTTACTGTGTTTT
AATTGCATCCCCTAAAACAGAAACAGGAATTGAAAGAATGACAATTATGACACAAACAACGGATGGATTTGAATTGAGTG
AACGAGACTTAGAAATGCGTGGTCCTGGAGATTTCTTTGGTGTTAAACAAAGTGGGTTGCCAGATTTCTTAGTTGCCAAT
TTAGTTGAAGATTATCGTATGTTAGAAGTTGCTCGTGATGAAGCAGCTGAACTTATTCAATCTGGCGTATTCTTTGAAAA
TACGTATCAACATTTACGTCATTTTGTTGAAGAAAATTTATTACATCGCAGTTTTGACTAA

Domains

Predicted by InterProScan.

RecG wedge domain (RecG_wedge)

(16-175)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(606-663)

Helicase conserved C-terminal domain (Helicase_C)

(464-579)

DEAD/DEAH box helicase (DEAD)

(267-422)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8NX11

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Bacillus subtilis subsp. subtilis str. 168

53.073

97.23

0.516
  recG/mmsA Streptococcus pneumoniae R6

50.388

94.023

0.474
  recG/mmsA Streptococcus pneumoniae R36A

50.388

94.023

0.474
  recG Neisseria meningitidis strain C311

39.671

97.376

0.386