Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   OFU58_RS03425 Genome accession   NZ_CP107289
Coordinates   699366..699749 (+) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain BM4623     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 694366..704749
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OFU58_RS03415 (OFU58_03415) nolF 697265..698374 (-) 1110 WP_280588720.1 efflux RND transporter periplasmic adaptor subunit -
  OFU58_RS03420 (OFU58_03420) - 698443..699081 (-) 639 WP_262728204.1 hypothetical protein -
  OFU58_RS03425 (OFU58_03425) pilG 699366..699749 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  OFU58_RS03430 (OFU58_03430) pilH 699772..700134 (+) 363 WP_002116220.1 response regulator -
  OFU58_RS03435 (OFU58_03435) pilI 700195..700731 (+) 537 WP_002116439.1 chemotaxis protein CheW -
  OFU58_RS03440 (OFU58_03440) pilJ 700774..702852 (+) 2079 WP_005072794.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=739335 OFU58_RS03425 WP_000389061.1 699366..699749(+) (pilG) [Acinetobacter pittii strain BM4623]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=739335 OFU58_RS03425 WP_000389061.1 699366..699749(+) (pilG) [Acinetobacter pittii strain BM4623]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCAGAAACCTTATT
ACAGCGTGAAGGCTGTGAAGTGATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AATATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37