Detailed information
Overview
| Name | pilJ | Type | Machinery gene |
| Locus tag | OHM01_RS02675 | Genome accession | NZ_CP107274 |
| Coordinates | 520736..521716 (+) | Length | 326 a.a. |
| NCBI ID | WP_263936425.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain 1145734 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 515736..526716
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OHM01_RS02650 (OHM01_02650) | - | 516387..516896 (+) | 510 | WP_003687909.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| OHM01_RS02655 (OHM01_02655) | - | 517128..517709 (-) | 582 | WP_003690895.1 | superoxide dismutase | - |
| OHM01_RS02660 (OHM01_02660) | dnaB | 517873..519279 (+) | 1407 | WP_263936422.1 | replicative DNA helicase | - |
| OHM01_RS02665 (OHM01_02665) | pilH | 519434..520096 (+) | 663 | WP_263936423.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| OHM01_RS02670 (OHM01_02670) | pilI | 520128..520739 (+) | 612 | WP_263936424.1 | type IV pilus modification protein PilV | Machinery gene |
| OHM01_RS02675 (OHM01_02675) | pilJ | 520736..521716 (+) | 981 | WP_263936425.1 | PilW family protein | Machinery gene |
| OHM01_RS02680 (OHM01_02680) | pilK | 521695..522306 (+) | 612 | WP_012503481.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| OHM01_RS02685 (OHM01_02685) | pilL | 522308..522781 (+) | 474 | WP_012503482.1 | PilX family type IV pilin | Machinery gene |
| OHM01_RS02690 (OHM01_02690) | - | 522851..523159 (-) | 309 | WP_047920990.1 | AzlD family protein | - |
| OHM01_RS02695 (OHM01_02695) | - | 523156..523867 (-) | 712 | Protein_522 | AzlC family ABC transporter permease | - |
| OHM01_RS02700 (OHM01_02700) | dut | 524033..524485 (+) | 453 | WP_050164987.1 | dUTP diphosphatase | - |
| OHM01_RS02705 (OHM01_02705) | dapC | 524557..525744 (+) | 1188 | WP_003701073.1 | succinyldiaminopimelate transaminase | - |
| OHM01_RS02710 (OHM01_02710) | yaaA | 525900..526679 (+) | 780 | WP_003706583.1 | peroxide stress protein YaaA | - |
Sequence
Protein
Download Length: 326 a.a. Molecular weight: 35948.13 Da Isoelectric Point: 9.8915
>NTDB_id=739117 OHM01_RS02675 WP_263936425.1 520736..521716(+) (pilJ) [Neisseria gonorrhoeae strain 1145734]
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSIIVLIAVVSSYFTSRKLNDVANERLAIQQDLRNAATLIVRDARMAGSFG
CFNMSEHTKDDIVDSSNQTQSNLAKPGAKQENPLFSLKRSGMDKQLIPVAESIDIKYPGFIQRLNALVFQYGIDDLDASA
ETVVVSSCSKIAKPGKKISTLQKAKSALQITNDDKQNGNITRQKHVVNAYAVGRFGNNEESLFRFQLDDKGKWGNPQLLV
KKVKRMDVRYIYVSGCPEDEDAGKEEKFRYTNKFDKSKNAVTPAGVEVLLDSGLNAKIAASSDNSIYAYRINATIRGGNV
CANRTL
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSIIVLIAVVSSYFTSRKLNDVANERLAIQQDLRNAATLIVRDARMAGSFG
CFNMSEHTKDDIVDSSNQTQSNLAKPGAKQENPLFSLKRSGMDKQLIPVAESIDIKYPGFIQRLNALVFQYGIDDLDASA
ETVVVSSCSKIAKPGKKISTLQKAKSALQITNDDKQNGNITRQKHVVNAYAVGRFGNNEESLFRFQLDDKGKWGNPQLLV
KKVKRMDVRYIYVSGCPEDEDAGKEEKFRYTNKFDKSKNAVTPAGVEVLLDSGLNAKIAASSDNSIYAYRINATIRGGNV
CANRTL
Nucleotide
Download Length: 981 bp
>NTDB_id=739117 OHM01_RS02675 WP_263936425.1 520736..521716(+) (pilJ) [Neisseria gonorrhoeae strain 1145734]
ATGAAACGTAAAATGCTAAACGTACCAAAGGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTATAATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGTGGCAAACG
AGCGTCTTGCCATTCAACAGGATTTGCGGAATGCGGCAACATTAATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCCGAGCATACTAAAGACGATATTGTTGATTCAAGTAATCAAACTCAATCTAACCTTGCAAAACCCGG
TGCCAAACAAGAAAATCCCCTTTTTTCCTTAAAAAGGAGCGGCATGGATAAACAACTGATTCCCGTTGCTGAATCCATAG
ATATTAAATATCCGGGTTTTATCCAGCGCCTTAACGCATTGGTTTTCCAATACGGTATCGATGATCTTGATGCGAGTGCT
GAGACTGTTGTAGTCAGCAGCTGTTCCAAAATAGCAAAACCGGGTAAGAAAATATCTACCTTGCAAAAAGCAAAGAGTGC
ATTACAGATTACTAATGATGATAAACAAAATGGAAATATCACCCGTCAGAAACATGTGGTCAATGCCTATGCGGTCGGCA
GGTTTGGCAATAATGAGGAAAGTTTGTTCCGCTTCCAATTGGATGATAAGGGCAAGTGGGGTAATCCTCAGTTGCTCGTG
AAAAAGGTTAAACGTATGGATGTGCGGTATATTTATGTTTCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAAAA
ATTCAGATATACGAATAAATTCGACAAATCCAAAAATGCTGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGCC
TTAATGCCAAGATTGCCGCTTCTTCAGACAATAGTATTTATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTA
TGCGCAAACAGAACACTTTGA
ATGAAACGTAAAATGCTAAACGTACCAAAGGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTATAATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGTGGCAAACG
AGCGTCTTGCCATTCAACAGGATTTGCGGAATGCGGCAACATTAATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCCGAGCATACTAAAGACGATATTGTTGATTCAAGTAATCAAACTCAATCTAACCTTGCAAAACCCGG
TGCCAAACAAGAAAATCCCCTTTTTTCCTTAAAAAGGAGCGGCATGGATAAACAACTGATTCCCGTTGCTGAATCCATAG
ATATTAAATATCCGGGTTTTATCCAGCGCCTTAACGCATTGGTTTTCCAATACGGTATCGATGATCTTGATGCGAGTGCT
GAGACTGTTGTAGTCAGCAGCTGTTCCAAAATAGCAAAACCGGGTAAGAAAATATCTACCTTGCAAAAAGCAAAGAGTGC
ATTACAGATTACTAATGATGATAAACAAAATGGAAATATCACCCGTCAGAAACATGTGGTCAATGCCTATGCGGTCGGCA
GGTTTGGCAATAATGAGGAAAGTTTGTTCCGCTTCCAATTGGATGATAAGGGCAAGTGGGGTAATCCTCAGTTGCTCGTG
AAAAAGGTTAAACGTATGGATGTGCGGTATATTTATGTTTCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAAAA
ATTCAGATATACGAATAAATTCGACAAATCCAAAAATGCTGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGCC
TTAATGCCAAGATTGCCGCTTCTTCAGACAATAGTATTTATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTA
TGCGCAAACAGAACACTTTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilJ | Neisseria gonorrhoeae MS11 |
75.988 |
100 |
0.767 |