Detailed information NTG0073908

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: K6J99_RS14800
• Genome accession: NZ_AP024623
• Coordinates: 2804764..2805369 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain BEST3102
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2799764..2810369

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J99_RS14770 (BsBEST3102_28340)	-	2800577..2800966 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
K6J99_RS14775 (BsBEST3102_28350)	yajC	2801023..2801289 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
K6J99_RS14780 (BsBEST3102_28360)	tgt	2801326..2802471 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
K6J99_RS14785 (BsBEST3102_28370)	queA	2802498..2803526 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
K6J99_RS14790 (BsBEST3102_28380)	yrzS	2803556..2803756 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
K6J99_RS14795 (BsBEST3102_28390)	ruvB	2803749..2804753 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
K6J99_RS14800 (BsBEST3102_28400)	ruvA	2804764..2805369 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
K6J99_RS14805 (BsBEST3102_28410)	bofC	2805508..2806020 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
K6J99_RS14810 (BsBEST3102_28420)	csbX	2806068..2807375 (-)	1308	WP_003246197.1	MFS transporter	-
K6J99_RS14815 (BsBEST3102_28430)	iolG	2807446..2808471 (-)	1026	WP_004398990.1	inositol 2-dehydrogenase	-
K6J99_RS14820 (BsBEST3102_28440)	yrzF	2808709..2809356 (+)	648	WP_003246159.1	phosphotransferase	-
K6J99_RS14825 (BsBEST3102_28450)	-	2809402..2809524 (-)	123	WP_003229707.1	hypothetical protein	-
K6J99_RS14830 (BsBEST3102_28460)	-	2809504..2809899 (+)	396	WP_220096631.1	DUF5412 family protein	-
K6J99_RS14835 (BsBEST3102_28470)	-	2809906..2810046 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=73908 K6J99_RS14800 WP_003229717.1 2804764..2805369(-) (ruvA) [Bacillus subtilis strain BEST3102]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=73908 K6J99_RS14800 WP_003229717.1 2804764..2805369(-) (ruvA) [Bacillus subtilis strain BEST3102]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408