Detailed information NTG0737975

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: OD347_RS17125
• Genome accession: NZ_CP107079
• Coordinates: 3376003..3377166 (-)
• Length: 387 a.a.
• NCBI ID: WP_013353787.1
• Uniprot ID: A0A9P1JKJ4
• Organism: Bacillus velezensis strain LT-2
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3371003..3382166

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OD347_RS17095	-	3371270..3371689 (-)	420	WP_013353782.1	TIGR03826 family flagellar region protein	-
OD347_RS17100	comFC	3371763..3372452 (-)	690	WP_201261292.1	phosphoribosyltransferase family protein	Machinery gene
OD347_RS17105	-	3372458..3372742 (-)	285	WP_013353784.1	late competence development ComFB family protein	-
OD347_RS17110	-	3372801..3374185 (-)	1385	Protein_3315	DEAD/DEAH box helicase	-
OD347_RS17115	-	3374292..3375140 (-)	849	WP_088613544.1	DegV family protein	-
OD347_RS17120	degU	3375237..3375926 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
OD347_RS17125	degS	3376003..3377166 (-)	1164	WP_013353787.1	two-component sensor histidine kinase DegS	Regulator
OD347_RS17130	-	3377389..3378036 (+)	648	WP_065982455.1	YigZ family protein	-
OD347_RS17135	-	3378041..3379261 (+)	1221	WP_088613546.1	LCP family protein	-
OD347_RS17140	-	3379361..3380437 (-)	1077	WP_013353790.1	glycosyltransferase family 4 protein	-
OD347_RS17145	tuaH	3380570..3381766 (-)	1197	WP_088613547.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45028.85 Da
• Isoelectric Point: 7.1379

>NTDB_id=737975 OD347_RS17125 WP_013353787.1 3376003..3377166(-) (degS) [Bacillus velezensis strain LT-2]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKEAKQKKNKSFGLLGMKERVDLLEGTITIDSKLGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=737975 OD347_RS17125 WP_013353787.1 3376003..3377166(-) (degS) [Bacillus velezensis strain LT-2]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAACAGTCGCGCCAGCAATATGAGCAGCTGGTCGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAACTGGGCGACAAACTCGAAGTACATACCCGGCACGCAAGAAACCGCTTGTCGGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGACTCCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTGGGGCTTCTGCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATTATCGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCGGCGCAAATGCTGGCAAATGTTATGATGAGATCGGAATTGATAGAACGGATTTTCCGCGACCGCG
GTACGGAGGACGGCTTTCAGGAAATCAGAAATCTTCGCCAGAATGTGCGGAATGCTCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGATACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTGAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACTGCTGACTTTGTTGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATCAAGGAAGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTCGAAGGAACGATAACGATAGACTCTAAACTAGGTCTTG
GGACATTTATCATGATTAAGGTTCCTTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948