Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   OD347_RS14965 Genome accession   NZ_CP107079
Coordinates   2956795..2959086 (-) Length   763 a.a.
NCBI ID   WP_088613350.1    Uniprot ID   -
Organism   Bacillus velezensis strain LT-2     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2951795..2964086
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OD347_RS14925 - 2952255..2952686 (+) 432 WP_013353387.1 Na(+)/H(+) antiporter subunit B -
  OD347_RS14930 - 2952686..2953027 (+) 342 WP_013353388.1 Na(+)/H(+) antiporter subunit C -
  OD347_RS14935 - 2953020..2954501 (+) 1482 WP_088613349.1 Na+/H+ antiporter subunit D -
  OD347_RS14940 - 2954507..2954983 (+) 477 WP_065982196.1 Na+/H+ antiporter subunit E -
  OD347_RS14945 - 2954983..2955267 (+) 285 WP_045509491.1 Na(+)/H(+) antiporter subunit F1 -
  OD347_RS14950 mnhG 2955251..2955625 (+) 375 WP_045509488.1 monovalent cation/H(+) antiporter subunit G -
  OD347_RS14955 - 2955665..2956048 (-) 384 WP_045509485.1 hotdog fold thioesterase -
  OD347_RS14960 comA 2956070..2956714 (-) 645 WP_014472195.1 response regulator transcription factor Regulator
  OD347_RS14965 comP 2956795..2959086 (-) 2292 WP_088613350.1 histidine kinase Regulator
  OD347_RS14970 comX 2959098..2959262 (-) 165 WP_007613432.1 competence pheromone ComX -
  OD347_RS14975 - 2959262..2960173 (-) 912 WP_088613883.1 polyprenyl synthetase family protein -
  OD347_RS14980 degQ 2960325..2960465 (-) 141 WP_013353398.1 degradation enzyme regulation protein DegQ Regulator
  OD347_RS14985 - 2960930..2961271 (+) 342 WP_045509476.1 hypothetical protein -
  OD347_RS14990 - 2961278..2962501 (-) 1224 WP_045509474.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 763 a.a.        Molecular weight: 88450.67 Da        Isoelectric Point: 7.4202

>NTDB_id=737969 OD347_RS14965 WP_088613350.1 2956795..2959086(-) (comP) [Bacillus velezensis strain LT-2]
MKSKYNKISVVLILLTLVYVIYLTYISTNNLLVGATISQNKQGEIKIKDVEDFTMAYYAGVQKGDIVKNINHQNVKSINI
QMNKLKNVNSMVVDRNGHDIEIKLNLFNDRNFSTYLIPIIFYVVCLFCCFFIIKINEEKNLKSALVLIVFLLSASIAYIS
AGGSAKGDLLSRCIMLLTLITVPLNYLLFLYHYFKELGTVLFSKKVFVLYLFPTINILFELFRSQLSFGDFIPKFNLISF
FLLFLIVAYYFIVILRRNKDTDQAHIIKVLVVINILAFSPFLCLYLIPYVFFNDYYVSSFLTASFMLLIPFSLVYQFMSN
KIYNVDFILSKLKYYGFLALTPTIILVTTIELLREPEENFYNLKLTFLIYILMLAVFYYKEILDFRFKLKRVSERFNYQD
SIYKFTQLIRNSSSLNQVFGELKTTILEVTLTSKVYIFEVTYDGNVKAFDERDSSLIDDYQVLLNSVTVEIGKITEFNQG
FAMKVGERGDRSFVVLCLSKMNTPRLSREEISWLKTLSFYVNVSIENVMKIEELMNHLEDLKKQETNPVWLKKLMFTIEE
KQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGLVKA
VSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGCNQE
EGSGQAMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2292 bp        

>NTDB_id=737969 OD347_RS14965 WP_088613350.1 2956795..2959086(-) (comP) [Bacillus velezensis strain LT-2]
ATGAAGTCCAAGTACAATAAGATTTCAGTTGTCTTAATTCTGCTTACATTGGTATATGTCATTTATCTGACTTATATAAG
CACAAATAATCTTTTAGTCGGCGCCACAATTTCTCAAAATAAACAGGGCGAAATTAAAATAAAAGATGTAGAAGATTTTA
CAATGGCATATTACGCCGGAGTGCAAAAGGGAGATATAGTAAAGAATATTAACCACCAAAATGTAAAGTCAATTAATATT
CAAATGAATAAGCTGAAAAATGTAAACTCTATGGTCGTTGATAGAAACGGTCATGATATTGAGATTAAGCTCAATTTATT
TAATGATAGGAACTTCAGTACTTACTTAATACCGATAATTTTTTATGTAGTATGTTTATTTTGCTGTTTCTTCATCATCA
AAATAAATGAAGAAAAAAACTTAAAATCTGCTTTGGTACTAATTGTATTTCTTTTGTCTGCTTCAATTGCATATATTAGT
GCTGGAGGGTCGGCAAAAGGTGATTTGCTCAGCAGATGTATCATGTTGTTAACATTAATAACTGTACCATTAAATTATCT
TCTGTTTCTTTATCATTACTTTAAAGAATTAGGTACAGTGCTTTTCAGCAAAAAAGTTTTTGTATTGTATTTATTTCCAA
CTATAAATATATTATTTGAATTATTTCGGTCGCAATTATCTTTTGGTGATTTTATTCCAAAATTTAATTTGATTTCGTTT
TTTCTTCTTTTTTTAATTGTAGCATATTATTTTATTGTTATTTTGAGAAGAAACAAAGATACTGATCAGGCACATATTAT
AAAGGTGCTTGTAGTTATAAATATATTGGCATTTTCGCCTTTTTTATGTCTGTATCTTATACCATATGTATTTTTTAATG
ATTATTATGTCTCTTCTTTCTTAACAGCATCATTTATGCTGCTAATACCTTTTTCACTTGTATACCAATTCATGTCGAAT
AAAATATATAACGTTGATTTTATCTTAAGTAAGTTAAAATATTACGGCTTTTTAGCTTTAACCCCAACTATAATTCTGGT
TACGACAATAGAGTTATTACGTGAGCCGGAAGAAAATTTTTACAATCTAAAACTGACATTTTTAATATACATTTTAATGT
TAGCTGTTTTTTATTATAAAGAAATACTCGATTTCCGGTTTAAATTAAAAAGGGTCTCAGAAAGATTCAATTATCAAGAC
AGTATTTATAAGTTTACCCAATTAATCAGAAACTCGTCTTCTTTAAATCAGGTTTTTGGAGAATTAAAAACGACCATTCT
CGAAGTAACTCTTACGAGTAAAGTGTATATATTTGAAGTCACGTATGATGGGAATGTAAAGGCATTTGACGAAAGAGATT
CAAGTTTGATAGATGATTATCAAGTTCTTTTAAATAGTGTTACTGTTGAGATAGGAAAAATAACGGAGTTTAATCAAGGT
TTCGCAATGAAAGTAGGAGAGCGGGGAGATAGATCTTTCGTTGTTCTCTGTTTGTCTAAGATGAATACGCCCCGCTTATC
ACGTGAAGAAATTTCTTGGTTAAAAACATTATCTTTTTACGTTAATGTTTCAATAGAAAACGTGATGAAAATCGAAGAAC
TTATGAATCATCTCGAAGATTTAAAGAAACAGGAGACAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACGATTGAGGAA
AAGCAGCGGTCGGATTTGGCCCGTGATCTGCATGATTCGGTGCTGCAGGATTTGATTTCTTTGAAACGCCAGTGTGAGCT
GTTTCTGGCCGATTTTAAGAAAGAAGAGCCTTGTCACATAGAGGTGCAGGACAAGCTTCATCAGATGAATGAGCAGATGT
CGGATGTCATTTTGATGACCCGGGAGACGTGCCACGAGCTTCGGCCTCAGCTGCTGTATGATTTGGGTCTGGTGAAGGCG
GTATCCAAGCTTGCAGCTCAGCAGCAGGAGCGTGCTCCGTTTCATATCCGTCTGAATACGGGACGGTTTACGGCGGCGCT
GGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAATGCCATGAAGCATTCACAGGCGAATG
AGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGATGACGGGGTCGGATGCAATCAGGAA
GAAGGCAGCGGACAGGCGATGAGCATGGGGCTTTCGGGTATTAAGGAGCGCGTCCGGGCGCTTGACGGCCGGATGAAAAT
CGACACAAGTGAAGGAAATGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(563-632)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

53.896

100

0.544