Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   OD347_RS01990 Genome accession   NZ_CP107079
Coordinates   390357..391310 (+) Length   317 a.a.
NCBI ID   WP_013351008.1    Uniprot ID   A0AAP7N4J3
Organism   Bacillus velezensis strain LT-2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 385357..396310
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OD347_RS01965 - 385398..386825 (+) 1428 WP_162495005.1 HAMP domain-containing sensor histidine kinase -
  OD347_RS01970 rapC 386984..388132 (+) 1149 WP_088612148.1 tetratricopeptide repeat protein Regulator
  OD347_RS01975 phrC 388116..388235 (+) 120 WP_013351005.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  OD347_RS01980 - 388383..388484 (-) 102 WP_013351006.1 YjcZ family sporulation protein -
  OD347_RS01985 - 388579..389943 (-) 1365 WP_088612149.1 aspartate kinase -
  OD347_RS01990 ceuB 390357..391310 (+) 954 WP_013351008.1 ABC transporter permease Machinery gene
  OD347_RS01995 - 391300..392247 (+) 948 WP_003156331.1 iron chelate uptake ABC transporter family permease subunit -
  OD347_RS02000 - 392241..392999 (+) 759 WP_088612150.1 ABC transporter ATP-binding protein -
  OD347_RS02005 - 393021..393971 (+) 951 WP_065521914.1 siderophore ABC transporter substrate-binding protein -
  OD347_RS02010 - 394013..395440 (-) 1428 WP_088612151.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34975.26 Da        Isoelectric Point: 9.6741

>NTDB_id=737919 OD347_RS01990 WP_013351008.1 390357..391310(+) (ceuB) [Bacillus velezensis strain LT-2]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQASTLFESRLPRLASIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFIFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=737919 OD347_RS01990 WP_013351008.1 390357..391310(+) (ceuB) [Bacillus velezensis strain LT-2]
ATGAAGCTACGTTACTTACTTTTGTTACTGGCGGTATTGGCGTGTACTTCTATTTTTATCGGGGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAAGTACATTATTTGAAAGCCGGCTGCCGCGTCTGGCGAGCATTATTA
TTGCCGGCATGAGCCTGAGCATCTGCGGATTAATTATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCGAGGCTCGGTATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
CATCGCTTTTATTTTCGCGTTGGCGGGAAATTTCCTTTTTATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAATATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGATCTGATC
CAAAACCTGTCGTCTTGGCTGCAGGGGGATTTCTCATTGGTCGTCAAAGGCCGCTACGAGCTTTTATACTTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAGTTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATCATCGTGTCGCTTATCGCTTCACTTGTGATTTTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCGAATATGGTGTCAATCTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
AGCTCTGTTAGGTGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATATTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTGATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.481

99.685

0.533