Detailed information NTG0073767

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: CT3_RS05060
• Genome accession: NZ_AP019749
• Coordinates: 1103496..1104671 (-)
• Length: 391 a.a.
• NCBI ID: WP_066539448.1
• Uniprot ID: A0A2A7UTM4
• Organism: Comamonas terrigena NBRC 13299
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1098496..1109671

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CT3_RS05040 (CT3_09820)	-	1099340..1100536 (-)	1197	WP_098066088.1	amidohydrolase family protein	-
CT3_RS05045 (CT3_09830)	-	1100564..1101544 (-)	981	WP_066539455.1	tripartite tricarboxylate transporter substrate-binding protein	-
CT3_RS05050 (CT3_09840)	-	1101830..1102582 (+)	753	WP_066539452.1	GntR family transcriptional regulator	-
CT3_RS05055 (CT3_09850)	cutA	1103001..1103384 (+)	384	WP_066539450.1	divalent-cation tolerance protein CutA	-
CT3_RS05060 (CT3_09860)	pilA	1103496..1104671 (-)	1176	WP_066539448.1	signal recognition particle-docking protein FtsY	Machinery gene
CT3_RS05065 (CT3_09870)	-	1104700..1106157 (+)	1458	WP_066539446.1	pitrilysin family protein	-
CT3_RS05070 (CT3_09880)	-	1106187..1107533 (+)	1347	WP_225608782.1	pitrilysin family protein	-
CT3_RS05075 (CT3_09890)	rsmD	1107530..1108291 (+)	762	WP_083520534.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
CT3_RS05080 (CT3_09900)	coaD	1108457..1108951 (+)	495	WP_066539442.1	pantetheine-phosphate adenylyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 41154.01 Da
• Isoelectric Point: 5.7486

>NTDB_id=73767 CT3_RS05060 WP_066539448.1 1103496..1104671(-) (pilA) [Comamonas terrigena NBRC 13299]
MFSFFKKKPPHTESAAPEAADVRPDAQAPLSDVPAPALPQPATGEPAKGGTMGWLRNTFGGAKADATPAEAAPSDFSIPV
VAEPQAKPEAAGERQGWMDRLKAGLRKTGTSITTVFTGTRIDDALYEELEDALLMADTGVKATQHLLEDLKRRVKESKTT
EPAAVKGLLAEALTDLLAPLQKPLTIGEHQPTVLMVTGVNGAGKTTSIGKLTKHLADNGQTVLLAAADTFRAAAREQLGV
WATRNTVEIVSQEGGDPAAVSFDAVSAGKARKKDVVLVDTAGRLPTQLHLMEELKKIKRVVSKADGTAPHEVLLVIDGNT
GQNALNQVKAFDEALGLTGLIVTKLDGTAKGGVLAAIAQEKPIPVYFIGVGEKVEDLETFNAREFAQALLA

Nucleotide

• Length: 1176 bp

>NTDB_id=73767 CT3_RS05060 WP_066539448.1 1103496..1104671(-) (pilA) [Comamonas terrigena NBRC 13299]
ATGTTCAGTTTTTTCAAGAAAAAGCCCCCACACACCGAGTCTGCCGCTCCCGAAGCGGCGGATGTCCGGCCCGATGCGCA
GGCACCTCTGTCTGACGTGCCCGCCCCTGCCTTGCCCCAGCCGGCCACAGGTGAGCCCGCCAAAGGCGGCACCATGGGCT
GGCTGCGCAACACCTTTGGCGGCGCCAAGGCGGATGCTACCCCGGCTGAAGCCGCACCGTCGGATTTCTCCATCCCCGTC
GTCGCCGAACCCCAGGCCAAGCCCGAGGCTGCGGGCGAGCGCCAGGGCTGGATGGACCGCCTCAAGGCGGGCCTGCGCAA
GACCGGCACCAGCATCACCACCGTCTTCACCGGCACGCGCATCGATGATGCCCTGTATGAAGAGCTGGAAGACGCGCTGC
TTATGGCCGACACCGGCGTCAAGGCCACCCAGCATCTGCTGGAAGACCTCAAGCGCCGCGTCAAGGAAAGCAAGACCACC
GAGCCAGCCGCCGTCAAAGGCCTGCTGGCCGAGGCCCTGACCGATCTGCTGGCCCCGCTGCAAAAACCGCTGACGATTGG
CGAACACCAGCCCACCGTGCTGATGGTGACCGGCGTCAATGGCGCAGGCAAGACCACGTCGATCGGCAAGCTGACCAAGC
ACCTGGCCGACAACGGCCAGACCGTGCTGCTGGCAGCCGCCGACACCTTCCGCGCTGCGGCACGCGAACAGCTGGGCGTC
TGGGCCACCCGCAACACGGTGGAAATCGTCAGCCAGGAAGGCGGCGATCCCGCGGCGGTCAGCTTTGACGCGGTCTCCGC
CGGCAAGGCCCGCAAAAAGGATGTGGTGCTGGTCGACACCGCCGGCCGTCTGCCCACCCAGCTGCACCTGATGGAAGAGC
TGAAAAAGATCAAGCGCGTGGTCAGCAAGGCCGATGGCACGGCCCCGCACGAGGTGCTGCTGGTGATCGACGGCAACACC
GGCCAGAACGCGCTCAACCAGGTCAAGGCCTTTGACGAGGCCCTGGGCCTGACCGGCCTGATCGTGACCAAGCTGGACGG
CACGGCCAAGGGCGGCGTGCTGGCGGCCATTGCCCAGGAAAAACCGATTCCCGTCTACTTCATCGGTGTGGGCGAGAAGG
TGGAAGACCTGGAAACCTTCAACGCCAGGGAATTTGCCCAGGCACTGCTGGCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (109-173)

• SRP54-type protein, GTPase domain (SRP54) (191-390)

3D structure

• AlphaFold DB: A0A2A7UTM4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.921	100	0.522