Detailed information NTG0073751

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: K6K01_RS14850
• Genome accession: NZ_AP024622
• Coordinates: 2815332..2815937 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain BEST3096
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2810332..2820937

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6K01_RS14820 (BsBEST3096_28450)	-	2811145..2811534 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
K6K01_RS14825 (BsBEST3096_28460)	yajC	2811591..2811857 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
K6K01_RS14830 (BsBEST3096_28470)	tgt	2811894..2813039 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
K6K01_RS14835 (BsBEST3096_28480)	queA	2813066..2814094 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
K6K01_RS14840 (BsBEST3096_28490)	yrzS	2814124..2814324 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
K6K01_RS14845 (BsBEST3096_28500)	ruvB	2814317..2815321 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
K6K01_RS14850 (BsBEST3096_28510)	ruvA	2815332..2815937 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
K6K01_RS14855 (BsBEST3096_28520)	bofC	2816076..2816588 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
K6K01_RS14860 (BsBEST3096_28530)	csbX	2816636..2817943 (-)	1308	WP_003246197.1	MFS transporter	-
K6K01_RS14865 (BsBEST3096_28540)	iolG	2818014..2819039 (-)	1026	WP_004398990.1	inositol 2-dehydrogenase	-
K6K01_RS14870 (BsBEST3096_28550)	yrzF	2819277..2819924 (+)	648	WP_003246159.1	phosphotransferase	-
K6K01_RS14875 (BsBEST3096_28560)	-	2819970..2820092 (-)	123	WP_003229707.1	hypothetical protein	-
K6K01_RS14880 (BsBEST3096_28570)	-	2820072..2820467 (+)	396	WP_220096631.1	DUF5412 family protein	-
K6K01_RS14885 (BsBEST3096_28580)	-	2820474..2820614 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=73751 K6K01_RS14850 WP_003229717.1 2815332..2815937(-) (ruvA) [Bacillus subtilis strain BEST3096]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=73751 K6K01_RS14850 WP_003229717.1 2815332..2815937(-) (ruvA) [Bacillus subtilis strain BEST3096]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408