Detailed information    

insolico Bioinformatically predicted

Overview


Name   crp   Type   Regulator
Locus tag   ACRAD_RS04855 Genome accession   NZ_AP019740
Coordinates   1062914..1063630 (-) Length   238 a.a.
NCBI ID   WP_005014956.1    Uniprot ID   A0A2T1IX76
Organism   Acinetobacter radioresistens DSM 6976 = NBRC 102413 = CIP 103788 strain NBRC 102413     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1057914..1068630
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACRAD_RS04835 (ACRAD_09340) - 1058703..1060022 (+) 1320 WP_005025384.1 adenylosuccinate synthase -
  ACRAD_RS04840 (ACRAD_09350) - 1060167..1060475 (+) 309 WP_005014961.1 phosphoethanolamine transferase domain-containing protein -
  ACRAD_RS04845 (ACRAD_09360) - 1060793..1061572 (+) 780 WP_005014959.1 M48 family metallopeptidase -
  ACRAD_RS04850 (ACRAD_09370) - 1061624..1062673 (-) 1050 WP_005025386.1 NADP(H)-dependent aldo-keto reductase -
  ACRAD_RS04855 (ACRAD_09380) crp 1062914..1063630 (-) 717 WP_005014956.1 cAMP-activated global transcriptional regulator CRP Regulator
  ACRAD_RS04860 (ACRAD_09390) - 1063777..1064199 (+) 423 WP_005025388.1 OsmC family protein -
  ACRAD_RS04865 (ACRAD_09400) clpB 1064437..1067016 (+) 2580 WP_005025391.1 ATP-dependent chaperone ClpB -

Sequence


Protein


Download         Length: 238 a.a.        Molecular weight: 26786.43 Da        Isoelectric Point: 4.6838

>NTDB_id=73743 ACRAD_RS04855 WP_005014956.1 1062914..1063630(-) (crp) [Acinetobacter radioresistens DSM 6976 = NBRC 102413 = CIP 103788 strain NBRC 102413]
MNSNFSQLSTDALSPGQLPESVKALLKRAKINRFPKRTTIIDAGTESKSLYLILKGSVSIVLREDDDREIVVAYLNPGDF
FGEMGLFEANPQRTAEVRTREMCEIAEISYENFHELSKQFPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LASQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETEGKAILIFDSSLEQNNESSASDFDTEDEE

Nucleotide


Download         Length: 717 bp        

>NTDB_id=73743 ACRAD_RS04855 WP_005014956.1 1062914..1063630(-) (crp) [Acinetobacter radioresistens DSM 6976 = NBRC 102413 = CIP 103788 strain NBRC 102413]
ATGAATTCTAATTTTTCACAACTCAGTACTGACGCCCTTTCTCCAGGTCAACTACCTGAATCAGTGAAAGCACTACTAAA
ACGAGCAAAAATTAACAGATTTCCAAAACGTACTACCATTATTGATGCCGGTACAGAATCCAAATCTTTATATCTCATCC
TTAAAGGTTCTGTTTCTATTGTACTGCGCGAAGATGATGACCGTGAAATTGTGGTAGCCTATTTAAATCCAGGTGACTTT
TTCGGAGAAATGGGGCTTTTTGAAGCCAATCCACAACGTACAGCTGAAGTTCGTACCCGGGAGATGTGTGAAATTGCAGA
AATTAGTTATGAGAATTTTCATGAACTGAGTAAACAATTTCCCGATTTAAGCTATGCAGTATTTGCCCAGCTCGTGCGTC
GCCTGAAAAACACTACACGTAAAGTAACTGATCTGGCTTTTATTGATGTGTCTGGACGAATTGCGCGCTGCCTGATTGAT
CTGGCATCTCAGCCTGAGGCCATGATTTTACCTAATGGCCGCCAGATCCGTATTACCCGTCAGGAAATCGGCCGTATTGT
AGGCTGCTCACGTGAAATGGTTGGCCGTGTCCTCAAAACTCTTGAGGAGCAAGGTATGATTGAAACAGAAGGTAAAGCGA
TACTGATCTTTGATAGTTCACTTGAACAGAATAATGAATCATCTGCCTCAGATTTTGATACTGAAGATGAAGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2T1IX76

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

88.235

100

0.882

  crp Vibrio cholerae strain A1552

47.596

87.395

0.416

  crp Haemophilus influenzae Rd KW20

48.205

81.933

0.395


Multiple sequence alignment