Detailed information NTG0073625

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: DO80_RS02125
• Genome accession: NZ_AP019730
• Coordinates: 401468..402268 (+)
• Length: 266 a.a.
• NCBI ID: WP_108304228.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain TN2wt
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 396468..407268

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DO80_RS02090 (DO80_03930)	pseH	396968..397510 (+)	543	WP_000742662.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
DO80_RS02095 (DO80_03940)	-	397443..398381 (-)	939	WP_108304224.1	tetraacyldisaccharide 4'-kinase	-
DO80_RS02100 (DO80_03950)	-	398378..399160 (-)	783	WP_108304225.1	NAD+ synthase	-
DO80_RS02110 (DO80_03960)	ilvC	399409..400401 (+)	993	WP_108304226.1	ketol-acid reductoisomerase	-
DO80_RS02115 (DO80_03970)	minD	400420..401226 (+)	807	WP_108304227.1	septum site-determining protein MinD	-
DO80_RS02120 (DO80_03980)	minE	401223..401456 (+)	234	WP_021306020.1	cell division topological specificity factor MinE	-
DO80_RS02125 (DO80_03990)	dprA	401468..402268 (+)	801	WP_108304228.1	DNA-processing protein DprA	Machinery gene
DO80_RS02130 (DO80_04000)	dprB	402265..402669 (+)	405	WP_108304229.1	Holliday junction resolvase RuvX	Machinery gene
DO80_RS02135 (DO80_04010)	-	402800..403162 (+)	363	WP_096392414.1	tetratricopeptide repeat protein	-
DO80_RS02140 (DO80_04020)	-	403351..403689 (+)	339	WP_000699916.1	hypothetical protein	-
DO80_RS02145 (DO80_04030)	-	403673..404233 (+)	561	WP_108304230.1	hypothetical protein	-
DO80_RS02150 (DO80_04040)	-	404244..404558 (+)	315	WP_108304231.1	glycoside hydrolase family protein	-
DO80_RS02155 (DO80_04050)	-	404658..404924 (+)	267	WP_000404335.1	hypothetical protein	-
DO80_RS02165	-	405254..405642 (+)	389	Protein_402	DUF1294 domain-containing protein	-
DO80_RS02170	-	405642..406427 (+)	786	WP_108304232.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29765.76 Da
• Isoelectric Point: 9.3534

>NTDB_id=73625 DO80_RS02125 WP_108304228.1 401468..402268(+) (dprA) [Helicobacter pylori strain TN2wt]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDIKLLRAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKGFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=73625 DO80_RS02125 WP_108304228.1 401468..402268(+) (dprA) [Helicobacter pylori strain TN2wt]
ATGAAAAGCAATTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTGAGAGCACCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAACAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGGTTTTATGCCCGTTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCTAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCTTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTGGAATATTGCGCCAAAAACCCGAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.865	100	0.959
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41