Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | DO80_RS02130 | Genome accession | NZ_AP019730 |
| Coordinates | 402265..402669 (+) | Length | 134 a.a. |
| NCBI ID | WP_108304229.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain TN2wt | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 397265..407669
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DO80_RS02095 (DO80_03940) | - | 397443..398381 (-) | 939 | WP_108304224.1 | tetraacyldisaccharide 4'-kinase | - |
| DO80_RS02100 (DO80_03950) | - | 398378..399160 (-) | 783 | WP_108304225.1 | NAD+ synthase | - |
| DO80_RS02110 (DO80_03960) | ilvC | 399409..400401 (+) | 993 | WP_108304226.1 | ketol-acid reductoisomerase | - |
| DO80_RS02115 (DO80_03970) | minD | 400420..401226 (+) | 807 | WP_108304227.1 | septum site-determining protein MinD | - |
| DO80_RS02120 (DO80_03980) | minE | 401223..401456 (+) | 234 | WP_021306020.1 | cell division topological specificity factor MinE | - |
| DO80_RS02125 (DO80_03990) | dprA | 401468..402268 (+) | 801 | WP_108304228.1 | DNA-processing protein DprA | Machinery gene |
| DO80_RS02130 (DO80_04000) | dprB | 402265..402669 (+) | 405 | WP_108304229.1 | Holliday junction resolvase RuvX | Machinery gene |
| DO80_RS02135 (DO80_04010) | - | 402800..403162 (+) | 363 | WP_096392414.1 | tetratricopeptide repeat protein | - |
| DO80_RS02140 (DO80_04020) | - | 403351..403689 (+) | 339 | WP_000699916.1 | hypothetical protein | - |
| DO80_RS02145 (DO80_04030) | - | 403673..404233 (+) | 561 | WP_108304230.1 | hypothetical protein | - |
| DO80_RS02150 (DO80_04040) | - | 404244..404558 (+) | 315 | WP_108304231.1 | glycoside hydrolase family protein | - |
| DO80_RS02155 (DO80_04050) | - | 404658..404924 (+) | 267 | WP_000404335.1 | hypothetical protein | - |
| DO80_RS02165 | - | 405254..405642 (+) | 389 | Protein_402 | DUF1294 domain-containing protein | - |
| DO80_RS02170 | - | 405642..406427 (+) | 786 | WP_108304232.1 | hypothetical protein | - |
| DO80_RS02175 (DO80_04070) | - | 406417..407562 (+) | 1146 | WP_108304233.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 134 a.a. Molecular weight: 15197.68 Da Isoelectric Point: 8.4869
>NTDB_id=73626 DO80_RS02130 WP_108304229.1 402265..402669(+) (dprB) [Helicobacter pylori strain TN2wt]
MILACDVGLKRIGIATLLNGVILPLEAILRHNRNQASRDLSDLLREKNIQVLVVGKPNESYADTNARIEYFIKLLDFKGE
IVFINEDRSSIEAYENLGHLGKKNKRLAIKDGRLDSLSACRILECYCQQVLKDR
MILACDVGLKRIGIATLLNGVILPLEAILRHNRNQASRDLSDLLREKNIQVLVVGKPNESYADTNARIEYFIKLLDFKGE
IVFINEDRSSIEAYENLGHLGKKNKRLAIKDGRLDSLSACRILECYCQQVLKDR
Nucleotide
Download Length: 405 bp
>NTDB_id=73626 DO80_RS02130 WP_108304229.1 402265..402669(+) (dprB) [Helicobacter pylori strain TN2wt]
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGGATCGCTACGCTTTTAAACGGCGTTATCTTGCCTTTAGAAGC
GATTTTGCGCCACAACAGGAATCAGGCCTCTAGGGATTTGAGCGATTTATTGAGGGAAAAAAACATTCAAGTGCTGGTGG
TGGGTAAGCCCAACGAAAGCTATGCGGACACGAACGCGCGCATTGAATATTTCATCAAGCTTTTGGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAGGACAGATCCAGCATAGAAGCCTATGAAAATTTAGGGCATTTGGGCAAGAAAAACAAGCGGCT
CGCTATTAAAGACGGCCGGCTAGACTCTTTGAGCGCTTGCAGGATCTTGGAGTGCTATTGCCAGCAGGTTTTGAAAGATC
GCTAG
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGGATCGCTACGCTTTTAAACGGCGTTATCTTGCCTTTAGAAGC
GATTTTGCGCCACAACAGGAATCAGGCCTCTAGGGATTTGAGCGATTTATTGAGGGAAAAAAACATTCAAGTGCTGGTGG
TGGGTAAGCCCAACGAAAGCTATGCGGACACGAACGCGCGCATTGAATATTTCATCAAGCTTTTGGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAGGACAGATCCAGCATAGAAGCCTATGAAAATTTAGGGCATTTGGGCAAGAAAAACAAGCGGCT
CGCTATTAAAGACGGCCGGCTAGACTCTTTGAGCGCTTGCAGGATCTTGGAGTGCTATTGCCAGCAGGTTTTGAAAGATC
GCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
93.985 |
99.254 |
0.933 |