Detailed information NTG0073594

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: K6J89_RS14885
• Genome accession: NZ_AP024621
• Coordinates: 2815465..2816070 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain BEST3095
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2810465..2821070

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J89_RS14855 (BsBEST3095_28440)	-	2811278..2811667 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
K6J89_RS14860 (BsBEST3095_28450)	yajC	2811724..2811990 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
K6J89_RS14865 (BsBEST3095_28460)	tgt	2812027..2813172 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
K6J89_RS14870 (BsBEST3095_28470)	queA	2813199..2814227 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
K6J89_RS14875 (BsBEST3095_28480)	yrzS	2814257..2814457 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
K6J89_RS14880 (BsBEST3095_28490)	ruvB	2814450..2815454 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
K6J89_RS14885 (BsBEST3095_28500)	ruvA	2815465..2816070 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
K6J89_RS14890 (BsBEST3095_28510)	bofC	2816209..2816721 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
K6J89_RS14895 (BsBEST3095_28520)	csbX	2816769..2818076 (-)	1308	WP_003246197.1	MFS transporter	-
K6J89_RS14900 (BsBEST3095_28530)	iolG	2818147..2819172 (-)	1026	WP_004398990.1	inositol 2-dehydrogenase	-
K6J89_RS14905 (BsBEST3095_28540)	yrzF	2819410..2820057 (+)	648	WP_003246159.1	phosphotransferase	-
K6J89_RS14910 (BsBEST3095_28550)	-	2820103..2820225 (-)	123	WP_003229707.1	hypothetical protein	-
K6J89_RS14915 (BsBEST3095_28560)	-	2820205..2820600 (+)	396	WP_220096631.1	DUF5412 family protein	-
K6J89_RS14920 (BsBEST3095_28570)	-	2820607..2820747 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=73594 K6J89_RS14885 WP_003229717.1 2815465..2816070(-) (ruvA) [Bacillus subtilis strain BEST3095]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=73594 K6J89_RS14885 WP_003229717.1 2815465..2816070(-) (ruvA) [Bacillus subtilis strain BEST3095]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408