Detailed information NTG0735594

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: OCL46_RS10250
• Genome accession: NZ_CP106811
• Coordinates: 1953913..1956750 (-)
• Length: 945 a.a.
• NCBI ID: WP_317629302.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain 10531
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1948913..1961750

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCL46_RS10240 (OCL46_10240)	yccS	1950090..1952240 (+)	2151	WP_003692098.1	YccS family putative transporter	-
OCL46_RS10245 (OCL46_10245)	-	1952722..1953006 (-)	285	WP_003692093.1	GIY-YIG nuclease family protein	-
OCL46_RS10250 (OCL46_10250)	pilC	1953913..1956750 (-)	2838	WP_317629302.1	PilC family type IV pilus tip adhesin	Machinery gene
OCL46_RS11890	pilC	1956878..1957000 (-)	123	WP_317629298.1	hypothetical protein	Machinery gene
OCL46_RS10255 (OCL46_10255)	-	1957687..1957950 (+)	264	WP_229433460.1	hypothetical protein	-
OCL46_RS10260 (OCL46_10260)	gnd	1958030..1959478 (+)	1449	WP_003688061.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	-
OCL46_RS10265 (OCL46_10265)	waaA	1959541..1960812 (+)	1272	WP_010360974.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
OCL46_RS10270 (OCL46_10270)	-	1960853..1961302 (+)	450	WP_229930593.1	CopD family copper resistance protein	-

Sequence

Protein

• Length: 945 a.a.
• Molecular weight: 103388.56 Da
• Isoelectric Point: 9.6969

>NTDB_id=735594 OCL46_RS10250 WP_317629302.1 1953913..1956750(-) (pilC) [Neisseria gonorrhoeae strain 10531]
MSFNNNDEVVARKNGTAVFGTATYLPPYGKVSGFDADALKERANAVDWIRTTRPGLAGYAYTDVICRDAGQCPQLVYETK
FAFGQQGLQRNGNKLDIYEDKSRDNSPIYKLKDYPWLGVSFNLGSENTVKNGRSSGRLISSFSENNNNQTIVSTTRDRPI
SLGDRQREHTAVAYYLNAKLHLLDKKRIKDIAQGKTVDLGTLRPRVETTGRNWLSYWATWKIEDKGNITVRLGLPEVKAG
RCINKPNPNPKSALSPALTAPALWFGPVQNGKVQMYSASVSTYPDSSSSRIFLQELKTQTEPGKPGRYSLKSLNDGEIKS
RQPSFNGRQTIIRLDDGVHLIKLNGSKDEVAAFVNLNGNNTGKNDTFGIVKEANVNLEADEWKKVLLPWTVRGPDNDNKF
KSINQKPEKYSQRYRIRDNNGNRDLGDIVNSPIVAVGGYLATSANDGMVHIFKKTGTDQRGYELKLSYIPGTMPRKDIES
NDSTLAKELRAFAEKGYVGDRYGVDGGFVLRQVEDRVFMFGAMGLGGRGAYALDLSKTNGNYPAAAPLFDVKDGDKKGKN
RVEVELGYTVGTPQIGKTQNGTYSAFLASGYAAKQIDDSTNKTALYVYDLKDTLGTPIAKIEVKDGKGGLSSPTLVDKDL
DGIVDIAYAGDRGGNMYRFDLSGDNPSKWTVRTIFQGTKPITSAPAVSRLADKRVVIFGTGSDLSEQDVVDKDQQYIYGI
FDDDKGTVKVTVQNGTGGGLLEQVLKEENKTLFLNKGSDGSGSKGWVVKLKEGQRVTVKPTVVLRTAFVTIRKYKDDGCG
ADTAILGINTADGGALTPRSARPIVPEANKDVAQYSGHKTTSKGKSIPIGCMEKGGKTVCPNGYVYDKPVNVRYLDEKKT
DDFPVTADGDAGGSGIDPAGRRPGKNNRCFSKKGVRTLLMNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 2838 bp

>NTDB_id=735594 OCL46_RS10250 WP_317629302.1 1953913..1956750(-) (pilC) [Neisseria gonorrhoeae strain 10531]
ATCTCATTCAACAATAACGATGAAGTTGTTGCTCGAAAAAACGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCCGCC
CTACGGCAAGGTTTCCGGTTTTGATGCCGACGCTCTGAAAGAGCGCGCCAATGCCGTTGATTGGATTCGTACCACCCGGC
CCGGGCTGGCAGGCTACGCCTACACCGACGTCATATGCAGAGACGCAGGGCAATGCCCCCAACTTGTCTATGAGACCAAA
TTTGCCTTCGGTCAACAAGGGTTGCAAAGAAATGGCAACAAGCTGGATATATACGAAGACAAAAGCCGCGACAATTCGCC
CATTTACAAATTGAAGGATTATCCATGGTTGGGCGTATCTTTCAATTTGGGCAGCGAGAATACCGTCAAAAATGGCAGAT
CATCCGGCAGATTGATATCTTCTTTTAGTGAAAACAATAATAATCAAACCATCGTCTCTACGACACGAGACCGCCCTATT
TCCCTTGGCGACCGGCAGCGCGAACATACCGCCGTGGCCTATTATCTGAACGCCAAGCTGCACCTGCTGGACAAAAAAAG
GATTAAAGATATCGCCCAAGGCAAAACAGTGGATTTGGGCACCTTGAGACCGCGCGTCGAGACGACAGGACGAAACTGGC
TAAGTTATTGGGCTACGTGGAAGATTGAAGATAAAGGGAACATTACAGTCCGCCTCGGCCTGCCGGAAGTCAAAGCAGGC
CGCTGCATCAACAAACCGAACCCCAATCCCAAATCAGCCCTTTCGCCGGCACTGACCGCCCCCGCGCTGTGGTTCGGCCC
TGTGCAAAATGGCAAGGTGCAGATGTATTCCGCTTCGGTTTCTACCTACCCCGACAGTTCGAGCAGCCGCATCTTCCTCC
AAGAGCTGAAAACTCAAACCGAACCCGGCAAACCCGGCCGCTATTCCCTCAAATCTTTGAATGATGGTGAGATTAAAAGT
CGACAGCCGAGTTTCAACGGGCGGCAAACAATCATCCGATTGGATGACGGCGTACATTTGATCAAACTGAATGGAAGCAA
GGATGAGGTCGCCGCTTTTGTCAATTTAAATGGAAACAACACCGGCAAAAACGACACTTTCGGCATTGTTAAGGAAGCGA
ACGTCAATCTTGAAGCTGACGAGTGGAAAAAAGTGCTGCTGCCTTGGACGGTTCGGGGTCCCGATAATGACAATAAATTT
AAATCAATTAACCAAAAACCAGAAAAATACAGCCAAAGATACCGCATCCGCGACAACAACGGCAATCGCGATTTGGGCGA
CATCGTCAACAGCCCGATTGTCGCGGTCGGCGGGTATCTGGCAACTTCTGCCAACGACGGGATGGTGCATATCTTCAAAA
AAACCGGCACAGACCAACGAGGCTACGAACTGAAGCTCAGCTACATCCCGGGTACGATGCCGCGCAAGGATATTGAAAGC
AACGATTCTACACTCGCCAAAGAGCTGCGCGCCTTTGCCGAAAAAGGCTATGTGGGCGACCGCTACGGCGTGGACGGCGG
CTTTGTCTTGCGTCAAGTTGAAGACCGCGTGTTTATGTTCGGCGCGATGGGTTTGGGCGGCAGGGGCGCGTATGCCTTGG
ATTTAAGCAAAACCAACGGCAATTATCCAGCCGCCGCTCCCCTGTTTGATGTCAAAGATGGCGATAAGAAAGGCAAAAAT
CGCGTGGAAGTGGAATTAGGCTACACCGTCGGCACGCCGCAAATCGGCAAAACCCAAAACGGCACATACTCCGCCTTCCT
CGCTTCCGGTTATGCGGCTAAACAAATTGACGACTCAACAAATAAAACCGCGCTGTATGTGTATGATTTGAAAGACACCT
TAGGTACGCCGATTGCAAAAATCGAAGTGAAGGACGGCAAGGGCGGGCTTTCGTCCCCCACGCTGGTGGATAAAGATTTG
GACGGCATTGTCGATATCGCCTATGCCGGCGACCGGGGCGGCAATATGTACCGCTTTGATTTGAGCGGCGACAATCCGTC
CAAATGGACTGTACGCACTATTTTCCAAGGCACAAAACCGATTACCTCCGCGCCCGCCGTTTCCCGACTGGCAGACAAAC
GCGTGGTCATCTTCGGTACGGGCAGCGATTTGAGTGAACAGGATGTAGTCGATAAGGATCAACAATATATTTACGGTATC
TTTGACGACGATAAGGGGACGGTTAAGGTAACGGTACAAAACGGCACGGGAGGCGGGCTGCTCGAGCAAGTGCTTAAAGA
GGAAAATAAAACATTATTCCTGAACAAGGGATCCGACGGATCGGGCAGTAAGGGGTGGGTAGTGAAGCTGAAGGAAGGAC
AGCGCGTTACCGTCAAACCGACCGTGGTATTGCGTACCGCCTTCGTAACCATCCGCAAGTATAAAGACGACGGCTGCGGC
GCGGATACCGCCATTTTGGGCATCAATACCGCCGACGGCGGCGCATTGACTCCGAGAAGCGCGCGCCCGATTGTGCCGGA
AGCCAATAAGGATGTCGCACAATATTCCGGCCATAAGACAACCTCCAAAGGCAAATCCATCCCTATAGGTTGTATGGAAA
AAGGCGGTAAAACCGTCTGCCCGAACGGATATGTTTACGACAAGCCGGTTAATGTGCGTTATCTGGACGAAAAGAAAACA
GACGATTTCCCCGTCACGGCAGACGGCGATGCGGGCGGCAGCGGTATAGACCCCGCCGGCAGGCGTCCCGGCAAAAACAA
CCGCTGCTTCTCCAAAAAAGGTGTGCGCACCCTGCTGATGAACGATTTGGACAGCTTGGATATTACCGGCCCGATGTGCG
GTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (425-754)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	73.548	100	0.75