Detailed information NTG0734581

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: N8888_RS14745
• Genome accession: NZ_CP106759
• Coordinates: 3214020..3215393 (+)
• Length: 457 a.a.
• NCBI ID: WP_053517026.1
• Uniprot ID: A0A4Q1CWL9
• Organism: Stenotrophomonas maltophilia strain SG.Y2
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3209020..3220393

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N8888_RS14730 (N8888_14730)	sucD	3209946..3210821 (-)	876	WP_005418610.1	succinate--CoA ligase subunit alpha	-
N8888_RS14735 (N8888_14735)	sucC	3210846..3212015 (-)	1170	WP_005418614.1	ADP-forming succinate--CoA ligase subunit beta	-
N8888_RS14740 (N8888_14740)	-	3212346..3213965 (+)	1620	WP_053517024.1	ATP-binding protein	-
N8888_RS14745 (N8888_14745)	pilR	3214020..3215393 (+)	1374	WP_053517026.1	sigma-54 dependent transcriptional regulator	Regulator
N8888_RS14750 (N8888_14750)	pilB	3215463..3217190 (-)	1728	WP_053517028.1	type IV-A pilus assembly ATPase PilB	Machinery gene
N8888_RS14755 (N8888_14755)	-	3217202..3220249 (-)	3048	WP_263175468.1	fused MFS/spermidine synthase	-

Sequence

Protein

• Length: 457 a.a.
• Molecular weight: 49678.08 Da
• Isoelectric Point: 6.5140

>NTDB_id=734581 N8888_RS14745 WP_053517026.1 3214020..3215393(+) (pilR) [Stenotrophomonas maltophilia strain SG.Y2]
MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPDGNGIELVSEIAQHYPRTPVA
MITAFGSMDLAVEALKAGAFDFVSKPVDIAVLRGLVKHALELNNSERPVPGPVAEQGARLLGNSPAMDVLRATIGKVARS
QAPVYILGESGVGKELVARTIHTQGARAAGPFVPVNCGAIPGELMESEFFGHRKGSFSGAHADKPGLFQAAHGGTLFLDE
VAELPLQMQVKLLRAIQEKSVRAVGAASEEPVDVRILSATHKDLAELVEDGRFRHDLYYRINVIELKVPPLRERRQDLPE
LAAAVLARLARSHGRTTPLLAPSALEALAQYAFPGNVRELENILERALALAEEDRIGVDDLRLPQHAPRMPGNGTAAEAV
VDLQPGSAALPSYIEQLERSAIQRALEENRWNKTRTAAQLGITFRALRYKLKKLGME

Nucleotide

• Length: 1374 bp

>NTDB_id=734581 N8888_RS14745 WP_053517026.1 3214020..3215393(+) (pilR) [Stenotrophomonas maltophilia strain SG.Y2]
ATGAACGAAACCCGCAGCGCCCTCGTCGTCGACGACGAACGCGACATCCGCGAACTGCTGGTGCTGACGCTCGGCCGGAT
GGGGCTGCGCATCAGTACTGCAGCCAACCTCGCCGAAGCGCGCGAGCTGCTGGCCAGCAATCCTTATGACCTGTGCATCA
CCGATATGCGCCTGCCGGATGGCAACGGCATCGAGCTGGTCAGCGAGATCGCCCAGCACTACCCGCGCACACCGGTGGCG
ATGATCACCGCCTTCGGCAGCATGGATCTGGCAGTGGAAGCCCTGAAGGCGGGCGCCTTCGACTTCGTCAGCAAGCCGGT
GGACATCGCCGTACTGCGCGGACTGGTCAAGCACGCGCTGGAATTGAACAACAGCGAGCGGCCCGTACCGGGCCCCGTCG
CCGAACAGGGCGCCCGGCTGCTCGGCAATTCGCCGGCGATGGACGTGTTGCGTGCCACCATCGGCAAAGTCGCGCGCAGC
CAGGCCCCGGTCTACATCCTCGGCGAATCCGGCGTCGGCAAGGAACTGGTCGCGCGGACCATCCACACCCAGGGGGCACG
TGCTGCCGGGCCGTTCGTGCCGGTCAACTGCGGCGCGATTCCCGGCGAACTGATGGAGAGCGAGTTCTTCGGCCACCGCA
AGGGCAGCTTCAGCGGCGCCCACGCCGACAAGCCCGGCCTGTTCCAGGCCGCCCATGGTGGCACCCTGTTCCTGGATGAG
GTCGCCGAGCTGCCGCTGCAGATGCAGGTGAAGCTGTTGCGCGCGATCCAGGAGAAGTCGGTGCGCGCGGTGGGTGCGGC
CAGCGAGGAACCGGTCGATGTGCGCATCCTGTCGGCCACCCACAAGGATCTGGCCGAGCTGGTCGAGGACGGCCGCTTCC
GCCACGACCTGTACTACCGCATCAATGTGATCGAACTGAAGGTGCCGCCGCTGCGCGAACGCCGCCAGGATCTGCCGGAG
CTGGCCGCTGCCGTGCTGGCACGGCTGGCCCGCAGCCACGGCCGCACCACGCCGCTGCTCGCGCCCTCGGCGCTGGAGGC
ACTGGCGCAGTACGCCTTCCCCGGCAACGTGCGCGAACTGGAGAACATCCTTGAGCGCGCGCTGGCCCTGGCCGAGGAAG
ACCGCATCGGTGTCGACGATCTGCGCCTGCCGCAACACGCCCCCCGCATGCCCGGCAACGGCACGGCCGCCGAAGCCGTG
GTCGATCTGCAGCCGGGCAGTGCCGCCCTGCCCTCGTACATCGAACAGCTCGAACGCAGCGCCATCCAGCGCGCGCTGGA
AGAAAACCGCTGGAACAAGACCCGTACCGCCGCGCAGCTGGGCATCACCTTCCGCGCGCTGCGCTACAAGCTGAAGAAGC
TGGGCATGGAGTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-115)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

• Bacterial regulatory protein, Fis family (HTH_8) (414-454)

3D structure

• AlphaFold DB: A0A4Q1CWL9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	63.355	99.125	0.628
pilR	Acinetobacter baumannii strain A118	47.835	100	0.484