Detailed information NTG0073432

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: R9P_RS21480
• Genome accession: NZ_AP024582
• Coordinates: 4526998..4528023 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain Ec387
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4521998..4533023

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R9P_RS21455 (R9P_41190)	metJ	4522559..4522876 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
R9P_RS21460 (R9P_41200)	yiiX	4522936..4523544 (+)	609	WP_001402675.1	YiiX family permuted papain-like enzyme	-
R9P_RS21465 (R9P_41210)	-	4523551..4524174 (+)	624	WP_001402674.1	TIGR02117 family protein	-
R9P_RS21470 (R9P_41220)	rpmE	4524229..4524441 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
R9P_RS21475 (R9P_41230)	priA	4524644..4526842 (+)	2199	WP_001395720.1	primosomal protein N'	Machinery gene
R9P_RS21480 (R9P_41240)	cytR	4526998..4528023 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
R9P_RS21485 (R9P_41250)	ftsN	4528115..4529074 (+)	960	WP_000068834.1	cell division protein FtsN	-
R9P_RS21490 (R9P_41260)	hslV	4529167..4529697 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
R9P_RS21495 (R9P_41270)	hslU	4529707..4531038 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
R9P_RS21500 (R9P_41280)	menA	4531105..4532031 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
R9P_RS21505 (R9P_41290)	rraA	4532124..4532609 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
R9P_RS21510 (R9P_41300)	zapB	4532694..4532939 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=73432 R9P_RS21480 WP_000644904.1 4526998..4528023(+) (cytR) [Escherichia coli strain Ec387]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=73432 R9P_RS21480 WP_000644904.1 4526998..4528023(+) (cytR) [Escherichia coli strain Ec387]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTATCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628