Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   N7980_RS18965 Genome accession   NZ_CP106671
Coordinates   3668977..3669927 (-) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain SRCM116301     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3663977..3674927
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N7980_RS18945 (N7980_18945) cdaE 3664845..3666263 (+) 1419 WP_014478836.1 MDR family MFS transporter -
  N7980_RS18950 (N7980_18950) yclQ 3666310..3667263 (-) 954 WP_003246619.1 petrobactin ABC transporter substrate-binding protein YclQ -
  N7980_RS18955 (N7980_18955) yclP 3667285..3668043 (-) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  N7980_RS18960 (N7980_18960) yclO 3668037..3668984 (-) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  N7980_RS18965 (N7980_18965) ceuB 3668977..3669927 (-) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  N7980_RS18970 (N7980_18970) thrD 3670312..3671676 (+) 1365 WP_043940054.1 aspartate kinase -
  N7980_RS18975 (N7980_18975) yczN 3671830..3671943 (+) 114 WP_003234495.1 YjcZ family sporulation protein -
  N7980_RS18980 (N7980_18980) yczM 3672025..3672114 (+) 90 WP_015482794.1 YjcZ family sporulation protein -
  N7980_RS18985 (N7980_18985) phrC 3672216..3672338 (-) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  N7980_RS18990 (N7980_18990) rapC 3672322..3673470 (-) 1149 WP_043940053.1 response regulator aspartate phosphatase RapC Regulator

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=733916 N7980_RS18965 WP_014475804.1 3668977..3669927(-) (ceuB) [Bacillus subtilis strain SRCM116301]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=733916 N7980_RS18965 WP_014475804.1 3668977..3669927(-) (ceuB) [Bacillus subtilis strain SRCM116301]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTTATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCAGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525