Detailed information NTG0733521

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RS71_RS06245
• Genome accession: NZ_CP104920
• Coordinates: 1442245..1443378 (-)
• Length: 377 a.a.
• NCBI ID: WP_057085274.1
• Uniprot ID: -
• Organism: Dickeya solani strain RNS 05.1.2A
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1437245..1448378

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RS71_RS06215	-	1438982..1439527 (+)	546	WP_057085268.1	gamma carbonic anhydrase family protein	-
RS71_RS06220	-	1439546..1439815 (-)	270	WP_022635089.1	DUF1488 domain-containing protein	-
RS71_RS06225	aroE	1439812..1440639 (-)	828	WP_057085270.1	shikimate dehydrogenase	-
RS71_RS06230	tsaC	1440658..1441227 (-)	570	WP_072143204.1	L-threonylcarbamoyladenylate synthase type 1 TsaC	-
RS71_RS06235	-	1441220..1441780 (-)	561	WP_022635092.1	type I DNA topoisomerase	-
RS71_RS06240	-	1441800..1442273 (-)	474	WP_022635093.1	DUF494 family protein	-
RS71_RS06245	dprA	1442245..1443378 (-)	1134	WP_057085274.1	DNA-protecting protein DprA	Machinery gene
RS71_RS06250	def	1443491..1444000 (+)	510	WP_057085276.1	peptide deformylase	-
RS71_RS06255	fmt	1444038..1444979 (+)	942	WP_022635096.1	methionyl-tRNA formyltransferase	-
RS71_RS06260	rsmB	1445040..1446335 (+)	1296	WP_057085278.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
RS71_RS06265	trkA	1446386..1447762 (+)	1377	WP_022635098.1	Trk system potassium transporter TrkA	-
RS71_RS06270	mscL	1447866..1448291 (+)	426	WP_022635099.1	large-conductance mechanosensitive channel protein MscL	-

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 40733.61 Da
• Isoelectric Point: 5.5603

>NTDB_id=733521 RS71_RS06245 WP_057085274.1 1442245..1443378(-) (dprA) [Dickeya solani strain RNS 05.1.2A]
MTDMEIWLRLASVKGLGAKRCAALFSQLLAENSYSVEYLKSLGLTENQTEQFLALSDLDIQNTACWLEKPDHHLVTFNSA
DYPPLLSNIVSPPLCLYVAGDVGVLSSPQVAVIGSRNNSAYGEQWGHVFSQQLSLNHLTITSGLAVGIDGIAHQAALQAG
GKTIAVLGSGLNQLYPRRHLTLADAIVQQGGALVSEFPLNTRPLPVNFPRRNRIISGLSLGVLVVEASMRSGSLVTARYA
LEQNREVFALPGPIGNPMTEGNHWLIQQGASLVTRPQDIFEQLHNGLRWFADIPNEGIPEIICATEGELELPFADVLATV
GDEVTPVDVVAERAGQPVPEVVSKLLDLELAGWIAAVPGGYVRIRRAGHVRRTHVLV

Nucleotide

• Length: 1134 bp

>NTDB_id=733521 RS71_RS06245 WP_057085274.1 1442245..1443378(-) (dprA) [Dickeya solani strain RNS 05.1.2A]
ATGACGGATATGGAAATCTGGTTGCGTCTGGCGTCGGTTAAGGGTCTTGGCGCTAAACGGTGCGCGGCATTGTTCAGCCA
ATTGCTGGCCGAAAATTCGTATTCGGTGGAATATCTGAAATCGCTGGGCCTGACGGAAAATCAGACCGAGCAGTTTCTCG
CCTTGAGCGATCTGGATATCCAGAATACAGCGTGCTGGCTGGAAAAGCCGGATCATCACCTGGTGACATTCAACAGCGCC
GATTATCCCCCTTTGCTCAGTAACATCGTTTCTCCCCCGCTATGTTTGTATGTCGCCGGAGATGTTGGCGTACTGTCATC
TCCGCAGGTCGCGGTGATTGGCAGTCGCAACAATAGCGCTTACGGCGAACAGTGGGGACATGTCTTCAGCCAGCAGCTCA
GCCTAAACCATCTGACGATCACCAGCGGACTTGCCGTGGGGATTGATGGCATTGCCCATCAGGCCGCCCTGCAGGCGGGC
GGGAAAACCATTGCGGTATTGGGGAGTGGATTAAACCAGCTTTATCCGCGCCGGCATCTGACTCTGGCGGATGCAATTGT
GCAGCAGGGTGGTGCACTGGTGTCGGAATTTCCCCTGAATACCCGGCCTCTACCGGTGAATTTCCCACGCCGCAATCGCA
TTATCAGCGGATTAAGCTTGGGAGTTCTGGTGGTGGAAGCGTCGATGCGTAGTGGCTCGCTGGTGACGGCGCGTTATGCA
TTGGAGCAGAATCGCGAGGTATTCGCTCTGCCCGGTCCGATTGGGAATCCGATGACGGAAGGTAACCACTGGTTGATACA
GCAAGGGGCCAGCCTGGTTACCCGGCCTCAGGACATTTTTGAACAACTCCATAATGGACTGCGCTGGTTTGCCGATATTC
CTAATGAGGGCATTCCGGAAATTATTTGTGCGACGGAAGGTGAACTGGAATTGCCATTTGCTGATGTGTTGGCTACCGTA
GGAGATGAGGTTACACCTGTTGACGTTGTCGCTGAACGTGCCGGCCAACCTGTGCCAGAGGTGGTGAGTAAGTTACTGGA
TCTGGAGTTAGCAGGGTGGATCGCAGCTGTACCCGGCGGCTATGTCCGTATAAGGAGGGCAGGCCATGTTCGACGTACTC
ATGTACTTGTTTGA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (309-360)

• DNA recombination-mediator protein A (DNA_processg_A) (67-274)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Vibrio campbellii strain DS40M4	49.322	97.878	0.483
dprA	Vibrio cholerae strain A1552	44.324	98.143	0.435
dprA	Legionella pneumophila strain ERS1305867	44.109	87.798	0.387
dprA	Glaesserella parasuis strain SC1401	49.823	75.066	0.374