Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGC   Type   Machinery gene
Locus tag   N8A75_RS13275 Genome accession   NZ_CP104878
Coordinates   2438367..2438663 (-) Length   98 a.a.
NCBI ID   WP_003230162.1    Uniprot ID   A0A809FGR8
Organism   Bacillus subtilis strain 4ZT     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2433367..2443663
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N8A75_RS13230 (N8A75_13230) tasA 2433774..2434559 (-) 786 WP_014480250.1 biofilm matrix protein TasA -
  N8A75_RS13235 (N8A75_13235) sipW 2434623..2435195 (-) 573 WP_003230181.1 signal peptidase I SipW -
  N8A75_RS13240 (N8A75_13240) tapA 2435179..2435940 (-) 762 WP_014480251.1 amyloid fiber anchoring/assembly protein TapA -
  N8A75_RS13245 (N8A75_13245) yqzG 2436212..2436538 (+) 327 WP_003246051.1 YqzG/YhdC family protein -
  N8A75_RS13250 (N8A75_13250) spoIITA 2436580..2436759 (-) 180 WP_029726723.1 YqzE family protein -
  N8A75_RS13255 (N8A75_13255) comGG 2436831..2437205 (-) 375 WP_014480253.1 ComG operon protein ComGG Machinery gene
  N8A75_RS13260 (N8A75_13260) comGF 2437206..2437589 (-) 384 WP_046160582.1 ComG operon protein ComGF Machinery gene
  N8A75_RS13265 (N8A75_13265) comGE 2437615..2437962 (-) 348 WP_046160583.1 ComG operon protein 5 Machinery gene
  N8A75_RS13270 (N8A75_13270) comGD 2437946..2438377 (-) 432 WP_014480256.1 comG operon protein ComGD Machinery gene
  N8A75_RS13275 (N8A75_13275) comGC 2438367..2438663 (-) 297 WP_003230162.1 comG operon protein ComGC Machinery gene
  N8A75_RS13280 (N8A75_13280) comGB 2438677..2439714 (-) 1038 WP_029317912.1 comG operon protein ComGB Machinery gene
  N8A75_RS13285 (N8A75_13285) comGA 2439701..2440771 (-) 1071 WP_004399124.1 competence protein ComGA Machinery gene
  N8A75_RS13290 (N8A75_13290) - 2440983..2441180 (-) 198 WP_046160584.1 CBS domain-containing protein -
  N8A75_RS13295 (N8A75_13295) corA 2441182..2442135 (-) 954 WP_015483432.1 magnesium transporter CorA -
  N8A75_RS13300 (N8A75_13300) yqhB 2442278..2443606 (+) 1329 WP_046160586.1 hemolysin family protein -

Sequence

Protein


Download         Length: 98 a.a.        Molecular weight: 10849.74 Da        Isoelectric Point: 6.7083

>NTDB_id=733128 N8A75_RS13275 WP_003230162.1 2438367..2438663(-) (comGC) [Bacillus subtilis strain 4ZT]
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKRIIITGGEVKVEH

Nucleotide


Download         Length: 297 bp        

>NTDB_id=733128 N8A75_RS13275 WP_003230162.1 2438367..2438663(-) (comGC) [Bacillus subtilis strain 4ZT]
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCGTGCTCTTTATTATTTCGATCTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAATCAAACCATTCAAAAAAAGGGCTGTGAAGGCCTACAAAACATGGTTAAGGCACAAATGACTG
CCTTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGTAAGCGCATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A809FGR8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGC Bacillus subtilis subsp. subtilis str. 168

100

100

1
  comGC Staphylococcus aureus MW2

41.304

93.878

0.388
  comGC Staphylococcus aureus N315

41.304

93.878

0.388
  comYC Streptococcus suis isolate S10

49.333

76.531

0.378