Detailed information NTG0732827

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: P5622_RS10600
• Genome accession: NZ_CP120598
• Coordinates: 2037413..2038018 (+)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain PRO115
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2032413..2043018

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5622_RS10565 (P5622_10565)	-	2032735..2032875 (-)	141	WP_004398683.1	hypothetical protein	-
P5622_RS10570 (P5622_10570)	yrzH	2032882..2033172 (-)	291	WP_003246047.1	DUF5412 family protein	-
P5622_RS10575 (P5622_10575)	-	2033257..2033379 (+)	123	WP_003229707.1	hypothetical protein	-
P5622_RS10580 (P5622_10580)	yrzF	2033425..2034072 (-)	648	WP_003246159.1	phosphotransferase	-
P5622_RS10585 (P5622_10585)	iolG	2034310..2035335 (+)	1026	WP_004398990.1	inositol 2-dehydrogenase	-
P5622_RS10590 (P5622_10590)	csbX	2035406..2036713 (+)	1308	WP_003246197.1	MFS transporter	-
P5622_RS10595 (P5622_10595)	bofC	2036761..2037273 (+)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
P5622_RS10600 (P5622_10600)	ruvA	2037413..2038018 (+)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
P5622_RS10605 (P5622_10605)	ruvB	2038029..2039033 (+)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
P5622_RS10610 (P5622_10610)	yrzS	2039026..2039226 (+)	201	WP_003222669.1	DUF2905 domain-containing protein	-
P5622_RS10615 (P5622_10615)	queA	2039256..2040284 (+)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
P5622_RS10620 (P5622_10620)	tgt	2040311..2041456 (+)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
P5622_RS10625 (P5622_10625)	yajC	2041493..2041759 (+)	267	WP_004398708.1	preprotein translocase subunit YajC	-
P5622_RS10630 (P5622_10630)	-	2041816..2042205 (-)	390	WP_004398667.1	TIGR04086 family membrane protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=732827 P5622_RS10600 WP_003229717.1 2037413..2038018(+) (ruvA) [Bacillus subtilis strain PRO115]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=732827 P5622_RS10600 WP_003229717.1 2037413..2038018(+) (ruvA) [Bacillus subtilis strain PRO115]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408