Detailed information NTG0732723

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: P5628_RS14100
• Genome accession: NZ_CP120577
• Coordinates: 2685003..2685608 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain PRO53
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2680003..2690608

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P5628_RS14070 (P5628_14070)	-	2680816..2681205 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
P5628_RS14075 (P5628_14075)	yajC	2681262..2681528 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
P5628_RS14080 (P5628_14080)	tgt	2681565..2682710 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
P5628_RS14085 (P5628_14085)	queA	2682737..2683765 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
P5628_RS14090 (P5628_14090)	yrzS	2683795..2683995 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
P5628_RS14095 (P5628_14095)	ruvB	2683988..2684992 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
P5628_RS14100 (P5628_14100)	ruvA	2685003..2685608 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
P5628_RS14105 (P5628_14105)	bofC	2685747..2686259 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
P5628_RS14110 (P5628_14110)	csbX	2686307..2687614 (-)	1308	WP_015483512.1	MFS transporter	-
P5628_RS14115 (P5628_14115)	iolG	2687685..2688710 (-)	1026	WP_277708863.1	inositol 2-dehydrogenase	-
P5628_RS14120 (P5628_14120)	yrzF	2688948..2689595 (+)	648	WP_049141074.1	phosphotransferase	-
P5628_RS14125 (P5628_14125)	-	2689641..2689763 (-)	123	WP_003229707.1	hypothetical protein	-
P5628_RS14130 (P5628_14130)	-	2689848..2689922 (+)	75	Protein_2740	hypothetical protein	-
P5628_RS14135 (P5628_14135)	-	2689926..2690294 (+)	369	WP_180960806.1	DUF5412 family protein	-
P5628_RS14140 (P5628_14140)	-	2690301..2690441 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=732723 P5628_RS14100 WP_003229717.1 2685003..2685608(-) (ruvA) [Bacillus subtilis strain PRO53]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=732723 P5628_RS14100 WP_003229717.1 2685003..2685608(-) (ruvA) [Bacillus subtilis strain PRO53]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATAATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408