Detailed information NTG0731248

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: N5980_RS05020
• Genome accession: NZ_CP104651
• Coordinates: 1030363..1032825 (+)
• Length: 820 a.a.
• NCBI ID: WP_104425884.1
• Uniprot ID: -
• Organism: Acinetobacter variabilis strain 2021CK-01005
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1025363..1037825

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N5980_RS04995 (N5980_04990)	-	1026362..1026847 (+)	486	WP_004784649.1	YaiI/YqxD family protein	-
N5980_RS05000 (N5980_04995)	-	1026863..1027756 (+)	894	WP_004784646.1	DMT family transporter	-
N5980_RS05005 (N5980_05000)	-	1027777..1028340 (-)	564	WP_004784643.1	PilZ domain-containing protein	-
N5980_RS05010 (N5980_05005)	-	1028367..1029602 (+)	1236	WP_004784642.1	lipoprotein-releasing ABC transporter permease subunit	-
N5980_RS05015 (N5980_05010)	lolD	1029595..1030278 (+)	684	WP_004784640.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
N5980_RS05020 (N5980_05015)	comA/comEC	1030363..1032825 (+)	2463	WP_104425884.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
N5980_RS05025 (N5980_05020)	-	1032814..1033788 (-)	975	WP_261635377.1	lysophospholipid acyltransferase family protein	-
N5980_RS05030 (N5980_05025)	sppA	1033916..1034938 (+)	1023	WP_005236706.1	signal peptide peptidase SppA	-
N5980_RS05035 (N5980_05030)	-	1034935..1035738 (+)	804	WP_005236704.1	alpha/beta fold hydrolase	-
N5980_RS05040 (N5980_05035)	purN	1035803..1036432 (-)	630	WP_005236703.1	phosphoribosylglycinamide formyltransferase	-
N5980_RS05045 (N5980_05040)	purM	1036439..1037509 (-)	1071	WP_005236701.1	phosphoribosylformylglycinamidine cyclo-ligase	-

Sequence

Protein

• Length: 820 a.a.
• Molecular weight: 93730.29 Da
• Isoelectric Point: 8.5437

>NTDB_id=731248 N5980_RS05020 WP_104425884.1 1030363..1032825(+) (comA/comEC) [Acinetobacter variabilis strain 2021CK-01005]
MLQWLCLGWILGLACMGKNFLNIHLNPITVIFLTVLCYLCGFKCNAILKKPLHKGLLVGTCILIGIFLGHGYANQQLSQR
LLNVEHEVQQKDIIVYVKRLNKLGDQSIQQPLEVLNLDGRTVTWMGFLSVNPLNTSQLSANHENLNTLELGQYYRLQGQV
RPNHSYATPGAFDAEKWALQQNVMAGFRIKQIEQLDSATVSTLGHSQYIREQRALTQQFLLWVEQKRLQLREFIAKQPVQ
NKGLLLALLTGDESLLNPATEQQFRRMGMSHLLAISGPHVLIFALMVCSVLRLFIARSMPQLYLRWPRQYFLALPFLFCV
VLYCAFVGFEIPAIRTLLICMIGVLLMLLRQNLQALKLLILSAALLLFIDPFSILSAAFWLSYGACFVLLRIYQTIQQRP
SEQNQTAIQKLYFAAKVLVESQWKIFLALFPLMMLFFKQIAWITPFSNLVAIPWIGLLIVPADILAAMIFFIAEPVSSML
FQLNDLLLNILLGFLNLLDHWFKPQLIPVAMNLWMIGLCILSLLILCLPRGVLPKSWIAVAAVPICIPQFYHPPFQLSVL
DVGQGQAIFLRHEIHNMMIDMGGYYDEEKFSIGKQVIMPFLSVQGVSQLDQLILTHLDQDHSGAYHSIKDQLKIQNIYAN
EVTDTATASNFQLCYQGQQWQWQNDLQIRVIAPKLEQLNTANFNKNDLSCVVYLQLKNAWPYQSFLLMGDAGWQTEYQLL
KDYPDLKVDVLVLGHHGSQHSSAYQFLQHYRPKLAIASAGRFNRYGHPSQLTQQRLKELDIPLLTTAEHGSLHFSQQGTQ
IILETERSRWKWLQKQNLTD

Nucleotide

• Length: 2463 bp

>NTDB_id=731248 N5980_RS05020 WP_104425884.1 1030363..1032825(+) (comA/comEC) [Acinetobacter variabilis strain 2021CK-01005]
ATGTTGCAATGGCTGTGTCTGGGCTGGATTTTAGGTCTGGCCTGTATGGGAAAAAATTTCCTCAATATTCATTTAAATCC
AATAACAGTCATATTTCTCACAGTACTTTGCTATCTGTGTGGTTTTAAATGTAATGCGATTCTGAAAAAGCCCTTACATA
AAGGATTGCTGGTAGGCACCTGCATTCTAATCGGGATATTTTTGGGACATGGTTATGCCAATCAACAGCTCAGCCAACGG
CTATTAAATGTTGAGCATGAAGTACAGCAAAAAGACATTATCGTTTATGTTAAACGCTTGAATAAACTCGGTGATCAATC
TATACAGCAGCCTTTGGAAGTATTAAACCTCGATGGACGCACCGTGACCTGGATGGGTTTTCTATCTGTAAATCCTCTCA
ATACTTCACAACTATCAGCGAATCATGAAAATTTAAATACGCTTGAACTGGGTCAGTATTACCGGCTGCAAGGTCAGGTA
CGTCCTAATCACAGTTATGCAACGCCCGGTGCTTTTGATGCTGAAAAATGGGCACTGCAACAGAATGTGATGGCCGGTTT
CCGGATCAAGCAGATAGAGCAACTTGATTCAGCTACTGTTTCTACACTGGGGCATAGTCAGTATATTCGAGAGCAAAGAG
CTTTAACTCAGCAATTTCTACTTTGGGTAGAACAAAAACGGCTGCAATTAAGAGAGTTCATAGCAAAGCAACCTGTACAA
AATAAAGGTCTGCTTCTGGCTTTGCTCACCGGAGATGAAAGCCTTTTAAATCCTGCAACTGAGCAGCAATTTCGACGTAT
GGGGATGAGTCACTTACTCGCGATTTCTGGCCCACATGTGCTGATCTTTGCCCTGATGGTCTGCTCCGTACTTCGATTAT
TCATTGCTCGAAGTATGCCTCAGCTTTATCTAAGATGGCCACGCCAGTATTTTCTGGCTTTGCCTTTTCTGTTTTGTGTG
GTGCTGTACTGTGCCTTTGTGGGTTTTGAAATCCCGGCAATCCGCACTCTGCTGATCTGTATGATTGGCGTTCTTCTCAT
GCTGCTCCGACAAAATCTGCAGGCTTTAAAACTTCTGATTCTGAGCGCTGCCTTACTGTTATTCATTGATCCCTTTAGTA
TCTTGTCCGCGGCTTTCTGGCTGTCCTATGGGGCTTGTTTTGTATTGCTCAGAATTTATCAGACCATTCAACAGCGACCA
TCCGAGCAAAATCAGACAGCAATACAAAAACTGTATTTTGCAGCTAAAGTGCTGGTGGAATCACAGTGGAAAATCTTTCT
CGCTTTATTTCCTTTAATGATGCTGTTTTTTAAGCAGATTGCTTGGATCACGCCGTTCAGCAATCTGGTCGCAATCCCTT
GGATCGGTCTGCTGATTGTACCGGCCGATATTCTGGCAGCGATGATATTTTTTATCGCTGAACCGGTGTCAAGCATGCTA
TTTCAGCTTAATGATCTGTTGCTGAATATCCTATTGGGCTTCTTAAATCTGCTGGATCACTGGTTTAAACCGCAGTTAAT
ACCAGTTGCGATGAATCTCTGGATGATTGGTCTATGCATCCTGTCTTTGCTGATTTTATGCTTACCACGTGGAGTATTAC
CAAAATCCTGGATAGCTGTCGCGGCGGTACCAATTTGTATTCCTCAATTCTATCATCCACCATTTCAGCTTTCAGTGCTG
GACGTCGGTCAAGGACAGGCGATATTCCTTCGTCATGAAATCCATAACATGATGATCGATATGGGCGGTTATTATGATGA
GGAAAAATTTAGTATTGGAAAGCAGGTAATCATGCCATTTCTGTCGGTACAGGGTGTTTCTCAACTGGATCAACTAATTT
TAACGCATCTGGATCAGGACCATAGTGGTGCTTATCACAGCATTAAAGACCAGCTCAAGATTCAGAATATCTATGCCAAT
GAAGTGACCGACACTGCAACCGCTTCAAACTTTCAATTATGTTATCAGGGACAGCAGTGGCAATGGCAGAATGATCTGCA
GATTAGGGTCATTGCACCAAAACTAGAACAATTAAATACCGCTAATTTCAATAAAAATGACCTGTCTTGTGTGGTCTATT
TGCAGCTCAAAAATGCCTGGCCTTATCAAAGTTTTCTGCTAATGGGAGATGCAGGTTGGCAGACTGAATATCAGTTACTC
AAAGACTATCCAGATTTAAAAGTGGATGTTTTGGTATTAGGCCATCATGGCAGTCAGCACAGTTCAGCTTATCAATTCTT
GCAGCATTATCGTCCTAAACTGGCGATTGCGTCTGCAGGAAGATTTAACCGTTATGGTCATCCAAGTCAGTTGACTCAAC
AGCGTCTCAAAGAATTGGATATTCCTTTATTGACTACAGCCGAGCATGGTAGTTTGCATTTCTCTCAGCAAGGAACTCAA
ATCATTCTAGAAACTGAAAGAAGTCGCTGGAAATGGTTACAAAAACAAAATCTAACTGACTGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (30-195)

• Competence protein (Competence) (248-530)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baylyi ADP1	48.36	100	0.485
comA/comEC	Acinetobacter baumannii D1279779	47.394	100	0.477
comA/comEC	Acinetobacter baumannii strain A118	46.667	100	0.47