Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   N5O82_RS21005 Genome accession   NZ_CP104580
Coordinates   4458902..4459309 (-) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas stutzeri strain GD04120     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4453902..4464309
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N5O82_RS20985 (N5O82_20980) - 4454860..4455726 (-) 867 WP_020305671.1 protein-glutamate O-methyltransferase -
  N5O82_RS20990 (N5O82_20985) - 4455787..4457835 (-) 2049 WP_011914956.1 methyl-accepting chemotaxis protein -
  N5O82_RS20995 (N5O82_20990) - 4457914..4458450 (-) 537 WP_013984316.1 chemotaxis protein CheW -
  N5O82_RS21000 (N5O82_20995) pilH 4458492..4458857 (-) 366 WP_003297216.1 twitching motility response regulator PilH -
  N5O82_RS21005 (N5O82_21000) pilG 4458902..4459309 (-) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  N5O82_RS21010 (N5O82_21005) gshB 4459546..4460496 (+) 951 WP_013984318.1 glutathione synthase -
  N5O82_RS21015 (N5O82_21010) - 4460584..4461477 (+) 894 WP_019405529.1 energy transducer TonB -
  N5O82_RS21020 (N5O82_21015) - 4461543..4462112 (+) 570 WP_053528280.1 YqgE/AlgH family protein -
  N5O82_RS21025 (N5O82_21020) ruvX 4462109..4462537 (+) 429 WP_011914962.1 Holliday junction resolvase RuvX -
  N5O82_RS21030 (N5O82_21025) pyrR 4462555..4463070 (+) 516 WP_014597998.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  N5O82_RS21035 (N5O82_21030) - 4463124..4464140 (+) 1017 WP_048330150.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=730670 N5O82_RS21005 WP_003282729.1 4458902..4459309(-) (pilG) [Stutzerimonas stutzeri strain GD04120]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=730670 N5O82_RS21005 WP_003282729.1 4458902..4459309(-) (pilG) [Stutzerimonas stutzeri strain GD04120]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACTGCTGAAACCCTGCT
GAAGAAAGTAGGTTGCGATGTCATCACCGCAGTGGACGGTTTCGATGCCCTCGCCAAGATTGCGGATACTCATCCCCGCA
TCATCTTTGTCGATATTATGATGCCCAGGCTGGACGGTTATCAGACCTGCGCGTTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCAGTGATCATGCTGTCTTCCAAAGACGGCCTGTTCGACAAGGCGAAGGGGCGCATTGTCGGCTCCGATCAATA
CCTCACCAAACCGTTCAGCAAAGAAGAGCTGCTCGGTGCAATCAAGGCTCATGTCCCTGATTTCGCGCCGGTGGAGCAAG
CGTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4