Detailed information NTG0730666

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: N5O82_RS16235
• Genome accession: NZ_CP104580
• Coordinates: 3420742..3422967 (-)
• Length: 741 a.a.
• NCBI ID: WP_125886269.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain GD04120
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3415742..3427967

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N5O82_RS16200 (N5O82_16195)	murB	3416132..3417151 (-)	1020	WP_079329147.1	UDP-N-acetylmuramate dehydrogenase	-
N5O82_RS16205 (N5O82_16200)	-	3417148..3417615 (-)	468	WP_125886266.1	low molecular weight protein-tyrosine-phosphatase	-
N5O82_RS16210 (N5O82_16205)	kdsB	3417617..3418381 (-)	765	WP_125886267.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
N5O82_RS16215 (N5O82_16210)	-	3418378..3418563 (-)	186	WP_011913743.1	Trm112 family protein	-
N5O82_RS16220 (N5O82_16215)	lpxK	3418609..3419613 (-)	1005	WP_125886268.1	tetraacyldisaccharide 4'-kinase	-
N5O82_RS16225 (N5O82_16220)	-	3419613..3420041 (-)	429	WP_013983259.1	biopolymer transporter ExbD	-
N5O82_RS16230 (N5O82_16225)	-	3420038..3420670 (-)	633	WP_013983260.1	MotA/TolQ/ExbB proton channel family protein	-
N5O82_RS16235 (N5O82_16230)	comA	3420742..3422967 (-)	2226	WP_125886269.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
N5O82_RS16240 (N5O82_16235)	-	3423112..3423627 (+)	516	WP_011913748.1	DUF2062 domain-containing protein	-
N5O82_RS16245 (N5O82_16240)	-	3423640..3424884 (-)	1245	WP_079329168.1	lipoprotein-releasing ABC transporter permease subunit	-
N5O82_RS16250 (N5O82_16245)	lolD	3424884..3425582 (-)	699	WP_013983263.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
N5O82_RS16255 (N5O82_16250)	-	3425590..3426837 (-)	1248	WP_020307157.1	lipoprotein-releasing ABC transporter permease subunit	-
N5O82_RS16260 (N5O82_16255)	-	3426871..3427506 (+)	636	WP_125886270.1	PilZ domain-containing protein	-
N5O82_RS16265 (N5O82_16260)	-	3427510..3427818 (+)	309	WP_011913753.1	hypothetical protein	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 81075.65 Da
• Isoelectric Point: 9.9660

>NTDB_id=730666 N5O82_RS16235 WP_125886269.1 3420742..3422967(-) (comA) [Stutzerimonas stutzeri strain GD04120]
MRTWMLALAAGLVLPRFLPALPAQWFCAALAAVGLLLLLRHRWVAPGLFLLGLSWACYQSQSAIDDRLPASMDGRTFWIE
GRVVGLPSRIGNVVRFELDDIQSRHAGLPSKVRLSWYDGPQLQAGERWRLAARLKRPHGMVNPHAFDYEAWLLARRIGAT
GTIKAGERLTASAASDGWRDQLRARLMAVPASDRQGAIAALVVGDDSGLSRGDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALLARLGAWPRRLPWLPWACGLALSGALAYGWLAGFDVPVRRACLMVTVVLVWRLRFRHLGVWLPLLLALDGVLLI
DPLVTLQPGFWLSFGAVAVLALAFSGRLGSWRWWMALTRAQWAATLGLLPLLLALGLPVSASGPLANLLAVPWVSLTVPF
ALLGTLLLPLAGVGEALLSVVGYSLALLFDVLAAIANWQPAWIAIGLPVWALALIGLGVLLLLLPAGIPLRSLGLLLLLP
LVFPPRVEVPDGRAQVWVLDVGQGLAVLVRTREHALLYDAGPKQGDFDTGERVVVPSLRTLGVTRLDLLLLSHADNDHSG
GADAVQRLLRVDRVVSGEPSRLAPDLGAERCESGSSWQWNDVRFSLWQWQMARDSNQQSCVLQIEANGERILLTGDIDQA
AERAWLASEQRTPSHWLLLPHHGSRSSSSEPFLRGVASHSALISRSLHNAFGHPHPSVVERLEILDIRAYDTAVHGAIRI
ELGSFSPPWLQRSQRRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=730666 N5O82_RS16235 WP_125886269.1 3420742..3422967(-) (comA) [Stutzerimonas stutzeri strain GD04120]
ATGCGCACATGGATGCTTGCGCTCGCCGCGGGTCTGGTCCTGCCACGCTTCCTTCCTGCCTTGCCCGCGCAGTGGTTCTG
TGCGGCGCTGGCGGCTGTCGGCCTGCTGCTCCTGCTGCGTCACCGCTGGGTGGCGCCGGGCTTGTTTCTGCTGGGCTTGA
GCTGGGCCTGCTACCAGAGCCAGAGCGCCATCGACGACCGCTTACCGGCGTCCATGGACGGTCGCACCTTTTGGATCGAG
GGGCGGGTAGTGGGGTTACCCAGCCGTATCGGCAATGTGGTGCGCTTCGAGCTCGACGACATCCAATCGCGCCATGCCGG
GTTGCCATCGAAGGTGCGGCTGTCCTGGTATGACGGTCCGCAGCTACAAGCCGGCGAGCGCTGGCGCTTGGCGGCGCGAC
TGAAGCGACCGCATGGCATGGTCAATCCCCACGCCTTCGATTACGAAGCCTGGTTGCTGGCGCGACGCATCGGCGCCACG
GGCACGATAAAGGCGGGCGAGCGCCTGACGGCGTCGGCGGCAAGCGACGGATGGCGCGATCAGCTTCGGGCGCGGCTCAT
GGCCGTTCCGGCATCCGATCGGCAGGGCGCCATCGCGGCACTGGTGGTGGGTGACGATTCCGGTTTGAGCCGCGGCGACT
GGCAGGTGTTGCAGGACACCGGCACCGTCCACCTGATGGTCATCTCCGGACAGCACATCGGCATGCTGGCGGGGCTGCTC
TATGGTCTGGTCGCATTGCTGGCTCGCCTGGGTGCGTGGCCGCGGCGGTTGCCCTGGTTGCCCTGGGCGTGCGGGCTGGC
GTTAAGCGGTGCGCTGGCCTATGGCTGGCTGGCCGGTTTCGATGTGCCGGTGCGTCGTGCCTGCCTGATGGTGACGGTGG
TGCTTGTCTGGCGATTGCGCTTTCGCCATCTGGGTGTCTGGTTGCCGCTGCTGCTGGCGCTCGATGGCGTCCTGCTGATC
GATCCTCTGGTGACATTGCAGCCGGGGTTCTGGCTGTCGTTTGGAGCGGTGGCGGTTCTGGCATTGGCGTTCTCGGGGCG
GCTCGGCTCATGGCGCTGGTGGATGGCCCTGACCCGGGCGCAGTGGGCGGCCACCCTTGGTCTGCTTCCGCTGTTGCTGG
CCCTCGGATTGCCGGTAAGTGCGAGCGGGCCGCTGGCCAATCTGCTTGCCGTACCCTGGGTGAGTCTGACCGTGCCCTTT
GCGTTGCTCGGTACGCTCCTGCTGCCCCTGGCCGGGGTTGGCGAAGCGCTGCTGTCAGTGGTCGGCTATTCGCTGGCATT
GCTGTTCGACGTCCTGGCGGCGATAGCCAATTGGCAACCCGCCTGGATTGCGATCGGCCTGCCCGTCTGGGCGCTGGCGT
TAATCGGGCTGGGCGTCCTGTTGCTGTTGCTGCCAGCGGGTATTCCGCTGCGTTCGCTGGGTTTGCTGCTGCTATTGCCG
CTGGTATTCCCGCCTCGTGTGGAGGTGCCAGACGGCCGGGCGCAGGTCTGGGTATTGGATGTAGGGCAGGGCCTGGCGGT
GCTTGTACGCACTCGCGAGCATGCACTGCTCTACGATGCCGGGCCGAAGCAGGGCGACTTCGATACGGGCGAGCGGGTGG
TCGTCCCTTCGCTCCGGACCCTTGGCGTGACTCGGTTGGACCTGCTGTTGCTGAGTCATGCCGATAATGATCATTCGGGC
GGTGCGGACGCGGTTCAGCGGTTGCTGAGGGTTGATCGGGTGGTCAGTGGCGAGCCGTCGCGCCTTGCGCCTGATCTGGG
CGCCGAACGTTGCGAAAGCGGTAGCAGCTGGCAGTGGAACGATGTGCGCTTCAGTCTGTGGCAATGGCAGATGGCACGCG
ACAGTAATCAGCAGTCCTGCGTGCTGCAAATCGAGGCCAATGGTGAGCGGATCCTGCTCACCGGCGACATCGACCAGGCC
GCGGAGCGGGCATGGCTGGCAAGCGAACAGCGCACCCCATCGCACTGGCTGTTGCTGCCCCACCATGGCAGCCGCAGCTC
GTCGTCAGAACCGTTTCTGCGCGGCGTCGCCTCCCATTCCGCGCTGATCTCGCGCAGCCTGCACAATGCCTTCGGCCACC
CACACCCAAGCGTGGTCGAGCGGCTCGAGATCCTCGATATCCGGGCCTACGACACCGCCGTGCATGGCGCAATCCGCATC
GAGCTGGGAAGCTTTTCGCCTCCTTGGCTACAACGTTCGCAGCGACGATTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (23-168)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-669)

• Competence protein (Competence) (201-464)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	67.087	96.356	0.646
comA	Ralstonia pseudosolanacearum GMI1000	36.891	100	0.378