Detailed information NTG0730634

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: N5O83_RS14995
• Genome accession: NZ_CP104579
• Coordinates: 3064363..3066576 (-)
• Length: 737 a.a.
• NCBI ID: WP_279534950.1
• Uniprot ID: A0AA42Q7M7
• Organism: Pseudomonas oleovorans strain GD04132
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3059363..3071576

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N5O83_RS14960 (N5O83_14950)	murB	3059793..3060812 (-)	1020	WP_279533602.1	UDP-N-acetylmuramate dehydrogenase	-
N5O83_RS14965 (N5O83_14955)	-	3060809..3061273 (-)	465	WP_147812233.1	low molecular weight protein-tyrosine-phosphatase	-
N5O83_RS14970 (N5O83_14960)	kdsB	3061273..3062037 (-)	765	WP_279533603.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
N5O83_RS14975 (N5O83_14965)	-	3062038..3062223 (-)	186	WP_003245207.1	Trm112 family protein	-
N5O83_RS14980 (N5O83_14970)	lpxK	3062246..3063247 (-)	1002	WP_279533604.1	tetraacyldisaccharide 4'-kinase	-
N5O83_RS14985 (N5O83_14975)	-	3063249..3063677 (-)	429	WP_003461976.1	biopolymer transporter ExbD	-
N5O83_RS14990 (N5O83_14980)	exbB	3063674..3064306 (-)	633	WP_039964821.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
N5O83_RS14995 (N5O83_14985)	comA	3064363..3066576 (-)	2214	WP_279534950.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
N5O83_RS15000 (N5O83_14990)	-	3066715..3067242 (+)	528	WP_279533605.1	DUF2062 domain-containing protein	-
N5O83_RS15005 (N5O83_14995)	-	3067280..3068524 (-)	1245	WP_279533606.1	lipoprotein-releasing ABC transporter permease subunit	-
N5O83_RS15010 (N5O83_15000)	lolD	3068524..3069210 (-)	687	WP_279534951.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
N5O83_RS15015 (N5O83_15005)	-	3069230..3070477 (-)	1248	WP_279533607.1	lipoprotein-releasing ABC transporter permease subunit	-
N5O83_RS15020 (N5O83_15010)	-	3070774..3071340 (+)	567	WP_279533608.1	PilZ domain-containing protein	-

Sequence

Protein

• Length: 737 a.a.
• Molecular weight: 80324.50 Da
• Isoelectric Point: 10.5622

>NTDB_id=730634 N5O83_RS14995 WP_279534950.1 3064363..3066576(-) (comA) [Pseudomonas oleovorans strain GD04132]
MLALALGLLMLRFLPSLPPGWLLLVAVGAGLGLLFSRLYPLGFFLLGLAWACSSAQSALDDRLDPQLDGRTLWLEGRVVG
LPEVSDGVVRFQFEEAHSRRAELPKRLRLAWYGGPPVQGGERWRVAVNLKRPHGSVNPQRFDYEAWLLAQRIGATGTIKS
GERLSFATGLGSWRDSLRQQLLVVPAFQRQGAIAALVLGDGSGLSTTDWRLLQHTGTVHLMVISGQHIALLAGFLYGLVA
LLAKLGAWPRRLPWLPCACALALSGALLYGFLAGFEVPVRRACVMVALVLLWRMRFRHLGAWWPLLLALIVVLLLEPLAS
LQPGFWLSFSAVAILVLIFGGRLGLWGWWRGLTRAQWTMAIGLLPMMLILGLPVSSSGPLANLIAVPWVGMVVVPLALLG
TLLLPVPLLGEGVLWLAGGALHLLFELLGAMAAWLPAWLPSNLPLWAWLLAAAGALLLLLPAGVPLRWPGIVLLLPALFL
PAPQLDDGRADIWVLDVGQGLAVLVRTREHALLYDAGPRFGDFDTGERIVLPSLRALNVRRLDLLLLSHADNDHAGGATV
IKAGMPVSRVVSGEPQRLADALGAEACESGQSWQWNRVTFRLWQWQRASSGNQLSCVLQIEAAGERLLLTGDIDVQAERA
LMQADLPLASQWLLAPHHGSRTSSSQAFIDAVAARHVLITRSRHNAFGHPHPQVLARYRAAGVEVHDTALHGALHIRLGQ
HGTARGLRSEPRFWREK

Nucleotide

• Length: 2214 bp

>NTDB_id=730634 N5O83_RS14995 WP_279534950.1 3064363..3066576(-) (comA) [Pseudomonas oleovorans strain GD04132]
ATGTTGGCGCTGGCCCTGGGGCTATTGATGCTGCGCTTTCTGCCGAGTTTGCCGCCGGGCTGGCTGTTGCTGGTGGCGGT
CGGTGCCGGCCTGGGGTTGCTGTTCTCGCGCCTCTATCCGTTGGGGTTCTTTCTGTTGGGGCTGGCCTGGGCCTGCAGTT
CGGCGCAATCGGCACTGGATGACCGCCTCGATCCGCAACTCGATGGCCGCACCCTGTGGTTGGAGGGCCGCGTGGTCGGT
CTGCCGGAGGTGTCCGATGGCGTGGTGCGCTTCCAGTTCGAAGAGGCGCACTCCCGACGTGCCGAGCTGCCGAAAAGGTT
ACGCCTGGCCTGGTATGGCGGGCCGCCGGTGCAGGGCGGCGAGCGCTGGCGGGTGGCGGTCAACCTGAAGCGCCCACACG
GATCGGTCAATCCGCAGCGTTTCGACTACGAGGCCTGGCTGTTGGCGCAGCGTATCGGCGCTACGGGTACGATCAAGTCA
GGTGAGCGCCTGTCATTCGCGACAGGGTTGGGCAGTTGGCGTGACAGCCTGCGTCAGCAACTGCTGGTCGTGCCGGCCTT
TCAGCGGCAGGGCGCCATTGCGGCGCTGGTTCTGGGAGATGGTTCGGGTCTGAGCACGACAGACTGGCGCCTGCTTCAGC
ACACCGGAACGGTGCATCTGATGGTTATCTCGGGGCAGCACATCGCGCTGCTGGCCGGTTTTCTCTATGGCCTGGTGGCG
TTGCTGGCGAAGCTCGGTGCCTGGCCCAGGCGCCTGCCCTGGTTGCCCTGTGCTTGTGCCCTGGCCCTGAGCGGGGCCTT
GCTCTACGGTTTTCTGGCCGGCTTCGAGGTGCCGGTGCGCCGAGCCTGCGTGATGGTCGCGCTGGTACTGCTATGGCGTA
TGCGTTTTCGTCATCTGGGCGCCTGGTGGCCGCTGCTGCTGGCCTTGATCGTGGTTCTGCTGCTGGAACCACTGGCGTCC
TTGCAACCGGGGTTCTGGTTGTCGTTTTCGGCAGTGGCGATTCTGGTGCTGATATTCGGTGGTCGTCTCGGTCTCTGGGG
GTGGTGGCGTGGTCTGACACGCGCGCAGTGGACCATGGCCATCGGCCTGTTGCCGATGATGTTGATCCTCGGTCTGCCGG
TGAGCAGTAGCGGGCCGCTGGCCAACCTGATTGCTGTGCCCTGGGTGGGCATGGTGGTCGTGCCTCTGGCGTTGTTGGGC
ACTTTGCTGCTGCCTGTTCCGCTGTTGGGTGAAGGGGTGTTGTGGCTGGCCGGTGGTGCATTGCACCTGTTGTTCGAACT
GCTCGGCGCCATGGCAGCCTGGCTACCGGCCTGGCTGCCCAGCAACCTGCCGCTGTGGGCCTGGCTATTGGCTGCGGCTG
GCGCGTTGCTGCTTCTGCTGCCGGCTGGTGTGCCCTTGCGCTGGCCCGGCATCGTGCTGCTATTGCCGGCATTGTTTCTG
CCGGCGCCACAGTTGGACGACGGGCGTGCCGACATCTGGGTGCTGGATGTAGGGCAGGGGCTGGCCGTGCTGGTGCGCAC
CCGGGAGCACGCTCTGCTTTACGATGCCGGGCCGCGTTTCGGCGATTTCGATACCGGCGAGCGTATCGTCCTGCCTTCGT
TGCGCGCGCTGAACGTGAGACGTCTCGATCTGCTGCTGCTCAGCCATGCCGATAACGATCATGCCGGTGGTGCAACCGTG
ATCAAGGCCGGGATGCCGGTATCGAGGGTCGTCAGCGGTGAACCGCAAAGGCTGGCCGATGCCCTCGGCGCCGAAGCGTG
CGAGTCAGGGCAGAGCTGGCAATGGAACAGGGTGACCTTCAGGCTGTGGCAGTGGCAACGGGCCAGCTCCGGTAACCAGC
TGTCCTGTGTACTGCAGATAGAGGCGGCGGGCGAACGCCTGCTGTTGACCGGTGATATCGACGTACAGGCCGAGCGGGCG
CTGATGCAGGCTGACTTGCCCCTGGCCTCGCAGTGGCTACTGGCTCCCCACCACGGCAGCCGCACGTCATCCAGCCAGGC
GTTCATCGATGCCGTCGCAGCGCGGCATGTGCTGATCACCCGCAGTCGCCACAACGCCTTCGGCCATCCTCACCCGCAGG
TGCTTGCACGCTATCGCGCTGCGGGTGTCGAGGTGCATGACACGGCGTTGCACGGTGCCCTGCATATTCGCCTGGGGCAA
CATGGTACGGCGCGAGGGTTGCGAAGCGAGCCACGTTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (496-672)

• Domain of unknown function (DUF4131) (DUF4131) (17-163)

• Competence protein (Competence) (196-461)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	67.409	97.422	0.657
comA	Ralstonia pseudosolanacearum GMI1000	34.845	100	0.396