Detailed information NTG0727621

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: N0U38_RS19185
• Genome accession: NZ_CP104107
• Coordinates: 4219053..4221269 (-)
• Length: 738 a.a.
• NCBI ID: WP_260270265.1
• Uniprot ID: -
• Organism: Pseudomonas mosselii strain PH4
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4214053..4226269

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N0U38_RS19150 (N0U38_19150)	murB	4214370..4215389 (-)	1020	WP_260270263.1	UDP-N-acetylmuramate dehydrogenase	-
N0U38_RS19155 (N0U38_19155)	-	4215386..4215850 (-)	465	WP_260270264.1	low molecular weight protein-tyrosine-phosphatase	-
N0U38_RS19160 (N0U38_19160)	kdsB	4215850..4216614 (-)	765	WP_096048370.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
N0U38_RS19165 (N0U38_19165)	-	4216611..4216796 (-)	186	WP_011532874.1	Trm112 family protein	-
N0U38_RS19170 (N0U38_19170)	lpxK	4216831..4217835 (-)	1005	WP_062573277.1	tetraacyldisaccharide 4'-kinase	-
N0U38_RS19175 (N0U38_19175)	-	4217835..4218269 (-)	435	WP_028690977.1	biopolymer transporter ExbD	-
N0U38_RS19180 (N0U38_19180)	exbB	4218266..4218901 (-)	636	WP_084942595.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
N0U38_RS19185 (N0U38_19185)	comA	4219053..4221269 (-)	2217	WP_260270265.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
N0U38_RS19190 (N0U38_19190)	-	4221414..4222055 (+)	642	WP_143514950.1	DUF2062 domain-containing protein	-
N0U38_RS19195 (N0U38_19195)	-	4221939..4222718 (-)	780	WP_062573274.1	ABC transporter permease	-
N0U38_RS19200 (N0U38_19200)	-	4222715..4223647 (-)	933	WP_062573273.1	ABC transporter ATP-binding protein	-
N0U38_RS19205 (N0U38_19205)	-	4223780..4224403 (-)	624	WP_260270266.1	glutathione S-transferase	-
N0U38_RS19210 (N0U38_19210)	-	4224835..4225074 (+)	240	WP_062573271.1	hypothetical protein	-
N0U38_RS19215 (N0U38_19215)	-	4225071..4225310 (+)	240	WP_028690971.1	DUF3077 domain-containing protein	-

Sequence

Protein

• Length: 738 a.a.
• Molecular weight: 79816.36 Da
• Isoelectric Point: 10.6880

>NTDB_id=727621 N0U38_RS19185 WP_260270265.1 4219053..4221269(-) (comA) [Pseudomonas mosselii strain PH4]
MRTGMLALVLGLLSLRFLPTLPPVGWLIPLLLLAVASLRTRAWPLGWLALGVCWACWSAQQALDDRLPATLDGRTLWLEG
RVVGLPTRTERGVRFELEQPQSRRARLPQRVQLSWFEGPPLRAGEHWRLAVNLRWPQGLLNPHGPDQEATLLARRVGATG
TVKAGTRQGEEASSWRDGLRQRLLATDAHGREAALAALVLGDGAGLAREDWQVLQATGTVHLLVISGQHIGLLAGLVYGL
VAGLARLGAWPRWLPWVPWACGLAMAAALAYGWLAGFGVPVQRACLMLAVVLLWRLRFRHLGAWVPLLMALSGVLLVEPL
ASLLPGFWLSFGAVAVLVLCFAARLGAWRPWQAWTRGQWVIAVGLLPVLLALGLPVSLSAPLANLLAVPWLSLGVLPLAL
LGTALLPVPGLGEVMLWLAGLSLDGLFAVLTRLAGLQPAWIPESLPLWAWLLVCLGAVLVLLPRGVPLRAPGAVMLLALW
APREQVPAGQVEVWQLDVGQGLAVLLRTRNHALLYDAGPAQGGRDLGETVVLPTLRKLGVNALDVMLISHGHADHAGGAA
AVRRGVPVARVLAGEVAGLEAASLCRSGERWQWDGVDFELWHWPQGASSNERSCVLRVQANGERLLLAGDMEAGAERAWL
AATDDPRVDWLQAPHHGSRTSSSEPFVQATAPRAVLISRGRHNGFGHPHGQVVERYRRHGVVVHDTAVEGALRLVLGSRG
GVEGVRRERRFWREVDEG

Nucleotide

• Length: 2217 bp

>NTDB_id=727621 N0U38_RS19185 WP_260270265.1 4219053..4221269(-) (comA) [Pseudomonas mosselii strain PH4]
ATGCGCACAGGGATGCTGGCGCTGGTGCTCGGGCTGCTGAGCCTGCGTTTTCTACCTACCCTGCCACCGGTCGGATGGCT
GATTCCATTGCTCTTGCTGGCCGTTGCCAGCCTGCGTACCCGGGCCTGGCCGTTGGGTTGGTTGGCGCTGGGTGTGTGCT
GGGCCTGCTGGTCGGCGCAGCAGGCCCTGGACGACCGCCTGCCTGCCACGCTGGATGGCCGCACGCTGTGGCTGGAGGGA
CGGGTGGTCGGCCTGCCGACCCGTACCGAGCGCGGCGTGCGTTTCGAGCTGGAGCAGCCGCAGTCACGCCGGGCGCGGTT
GCCGCAGCGGGTGCAATTGAGCTGGTTCGAGGGGCCGCCGCTGCGAGCGGGGGAGCACTGGCGGCTGGCGGTCAACCTGC
GTTGGCCGCAGGGCCTGCTCAACCCCCATGGCCCGGATCAGGAGGCCACGCTGTTGGCGCGGCGGGTCGGTGCCACCGGC
ACGGTCAAGGCCGGTACGCGCCAGGGCGAGGAGGCCAGCAGTTGGCGCGACGGCCTGCGCCAGCGCCTGCTGGCCACCGA
TGCCCATGGCCGGGAGGCGGCGTTGGCCGCCCTGGTGCTCGGGGATGGCGCAGGCCTGGCGCGGGAGGACTGGCAGGTGC
TGCAGGCCACCGGCACGGTACACCTGCTGGTGATTTCCGGGCAGCACATCGGCTTGCTGGCCGGATTGGTCTACGGGCTG
GTGGCGGGGCTGGCGCGCCTGGGGGCCTGGCCCCGGTGGTTGCCGTGGGTGCCCTGGGCCTGTGGCCTGGCGATGGCGGC
GGCATTGGCCTACGGCTGGCTGGCGGGGTTCGGCGTGCCGGTGCAGCGGGCGTGCCTGATGCTGGCGGTGGTGCTGCTCT
GGCGCTTGCGCTTTCGCCATCTGGGCGCCTGGGTGCCGTTGCTGATGGCGCTGTCGGGCGTGCTGCTGGTCGAGCCGCTG
GCCAGCCTGTTGCCGGGGTTCTGGCTGTCGTTCGGTGCGGTGGCGGTGCTGGTGCTGTGTTTTGCCGCCCGGCTGGGCGC
CTGGCGGCCCTGGCAGGCCTGGACCCGCGGCCAGTGGGTGATCGCCGTGGGGTTGCTGCCGGTGCTGCTGGCCTTGGGGC
TGCCCGTCAGCCTCAGTGCGCCGCTGGCCAATCTGCTGGCCGTGCCATGGCTGAGCCTGGGTGTGCTGCCGCTGGCGTTG
CTGGGTACGGCCCTGTTGCCGGTGCCTGGGCTGGGGGAGGTGATGCTGTGGCTGGCGGGGCTGTCGTTGGATGGGCTGTT
TGCCGTGTTGACGCGATTGGCAGGGCTGCAGCCGGCCTGGATACCTGAGTCACTGCCCTTGTGGGCCTGGCTGCTGGTGT
GCCTGGGTGCCGTGCTGGTGTTGCTGCCCCGGGGCGTGCCGTTGCGGGCGCCGGGCGCGGTCATGCTGCTGGCGCTGTGG
GCACCACGCGAGCAGGTGCCTGCGGGGCAAGTGGAGGTCTGGCAGCTGGATGTGGGGCAGGGCCTGGCGGTGCTGCTGCG
CACCCGCAATCACGCCTTGCTGTATGACGCAGGTCCGGCCCAGGGTGGCAGGGACCTGGGCGAGACGGTAGTGCTGCCGA
CCTTGCGCAAGCTTGGGGTGAACGCGCTGGATGTGATGCTGATCAGCCATGGCCATGCCGACCATGCCGGTGGGGCGGCG
GCGGTGCGGCGTGGGGTGCCGGTGGCGCGGGTGCTGGCCGGCGAGGTTGCCGGGCTGGAAGCGGCCTCGCTGTGCCGCAG
TGGCGAGCGCTGGCAGTGGGATGGCGTCGATTTCGAGCTCTGGCACTGGCCGCAGGGGGCTTCCAGCAACGAGCGTTCCT
GTGTGTTGCGGGTGCAGGCCAATGGCGAGCGCTTGCTGCTGGCCGGGGACATGGAGGCCGGCGCGGAGCGTGCGTGGCTG
GCTGCGACCGACGATCCTCGGGTGGACTGGTTGCAGGCGCCGCACCATGGCAGCCGCACGTCGTCCAGCGAGCCGTTCGT
CCAGGCCACGGCACCGCGCGCGGTGCTGATTTCCCGGGGGCGGCACAATGGTTTCGGGCATCCCCATGGGCAGGTGGTCG
AGCGCTATCGCCGCCACGGGGTGGTGGTGCATGACACGGCGGTGGAGGGGGCGTTGCGGTTGGTGCTGGGGAGTCGGGGT
GGGGTGGAAGGTGTGCGCAGGGAGCGGCGGTTCTGGCGTGAGGTTGACGAGGGCTGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (198-464)

• Domain of unknown function (DUF4131) (DUF4131) (21-166)

• Metallo-beta-lactamase superfamily (Lactamase_B) (497-672)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	59.11	97.425	0.576
comA	Ralstonia pseudosolanacearum GMI1000	35.655	100	0.409