Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   N2A94_RS01660 Genome accession   NZ_CP104048
Coordinates   298471..299472 (+) Length   333 a.a.
NCBI ID   WP_003106338.1    Uniprot ID   A0A0E2U976
Organism   Streptococcus parauberis strain KSP20     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 293471..304472
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N2A94_RS01635 (N2A94_01635) - 293799..294317 (+) 519 WP_003105572.1 hypothetical protein -
  N2A94_RS01640 (N2A94_01640) celB 294344..295686 (+) 1343 Protein_322 PTS cellobiose transporter subunit IIC -
  N2A94_RS01645 (N2A94_01645) - 295756..296844 (+) 1089 WP_013793724.1 DUF871 domain-containing protein -
  N2A94_RS01650 (N2A94_01650) - 296940..297194 (+) 255 WP_041828406.1 hypothetical protein -
  N2A94_RS01655 (N2A94_01655) - 297214..298299 (-) 1086 WP_004234636.1 Xaa-Pro peptidase family protein -
  N2A94_RS01660 (N2A94_01660) ccpA 298471..299472 (+) 1002 WP_003106338.1 catabolite control protein A Regulator
  N2A94_RS01665 (N2A94_01665) - 299516..300982 (+) 1467 WP_013793726.1 alpha-amylase -
  N2A94_RS01670 (N2A94_01670) - 301050..302048 (+) 999 WP_003104452.1 glycosyltransferase family 4 protein -
  N2A94_RS01675 (N2A94_01675) - 302050..303381 (+) 1332 WP_003103699.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36786.99 Da        Isoelectric Point: 6.0718

>NTDB_id=727337 N2A94_RS01660 WP_003106338.1 298471..299472(+) (ccpA) [Streptococcus parauberis strain KSP20]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPIVLAGTVDLEHQLPS
VNIDYKLAVSNVIDILVENHKKIAFVSGPLIDDINGKVRLLGYKEGLRKNKLDYKEGLVFEANYSYKEGFELAQRVINSG
ATAAYVGEDELAAGLLNGLFAAGKNVPEDFEIITSNDSPVVDYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEDLEEKEI
LLNHGIKRRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=727337 N2A94_RS01660 WP_003106338.1 298471..299472(+) (ccpA) [Streptococcus parauberis strain KSP20]
ATGAACACAGATGATACAATTACGATCTATGACGTTGCTCGCGAAGCAGGTGTTTCTATGGCAACAGTAAGTCGTGTTGT
CAACGGAAATAAAAACGTTAAAGAAAATACACGCAAAAAAGTGTTGGAAGTTATAGACCGTTTAGATTATCGTCCTAATG
CAGTTGCCCGAGGACTAGCAAGTAAAAAAACAACTACAGTAGGTGTGGTAATTCCAAATATTGCCAATAGTTATTTTTCA
ATTTTAGCAAAAGGGATTGATGATATTGCTGCAATGTACAAGTATAATATTGTCCTTGCATCAAGTGATGAAGATGATGA
TAAAGAGGTAAATGTTGTTAACACTCTATTTGCAAAACAAGTAGATGGTATTATCTTTATGGGTCACCATTTAACAGAGA
AAATTCGTGCAGAATTTTCTCGTTCACGTACACCAATCGTTCTAGCTGGAACAGTTGACTTGGAACATCAGTTACCAAGT
GTTAATATTGATTATAAATTGGCAGTTTCCAATGTAATTGATATTTTAGTAGAAAATCACAAAAAAATTGCTTTTGTGTC
TGGACCACTAATCGATGATATCAATGGAAAAGTGAGATTACTAGGCTATAAAGAAGGACTTAGAAAGAATAAGTTGGACT
ATAAAGAAGGATTAGTTTTTGAAGCTAATTATTCTTATAAAGAAGGTTTTGAATTAGCTCAACGCGTAATCAATTCAGGT
GCTACAGCAGCTTATGTTGGAGAAGATGAATTAGCAGCAGGCTTACTTAATGGTTTATTTGCAGCAGGGAAAAATGTTCC
TGAGGACTTTGAAATTATTACAAGTAACGATTCACCAGTTGTTGACTATACAAGACCAAATCTTTCTTCAATCAGTCAAC
CTGTGTATGATTTAGGAGCTGTCAGCATGCGTATGTTGACAAAAATCATGAACAAAGAAGATTTGGAAGAAAAAGAAATT
CTCCTAAACCATGGTATCAAACGTCGTGGTACAACAAAATAG

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(179-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E2U976

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.378

100

0.784
  ccpA Streptococcus pneumoniae D39

75.676

100

0.757
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556