Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   N0B18_RS16440 Genome accession   NZ_CP103995
Coordinates   3050331..3052643 (-) Length   770 a.a.
NCBI ID   WP_069964288.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM117109     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3045331..3057643
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N0B18_RS16400 (N0B18_16400) mrpB 3045798..3046229 (+) 432 WP_038429537.1 Na(+)/H(+) antiporter subunit B -
  N0B18_RS16405 (N0B18_16405) mrpC 3046229..3046570 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  N0B18_RS16410 (N0B18_16410) mrpD 3046563..3048044 (+) 1482 WP_003244432.1 Na+/H+ antiporter subunit D -
  N0B18_RS16415 (N0B18_16415) mrpE 3048050..3048526 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  N0B18_RS16420 (N0B18_16420) mrpF 3048526..3048810 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  N0B18_RS16425 (N0B18_16425) mnhG 3048794..3049168 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  N0B18_RS16430 (N0B18_16430) yuxO 3049207..3049587 (-) 381 WP_069837723.1 hotdog fold thioesterase -
  N0B18_RS16435 (N0B18_16435) comA 3049606..3050250 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  N0B18_RS16440 (N0B18_16440) comP 3050331..3052643 (-) 2313 WP_069964288.1 sensor histidine kinase Regulator
  N0B18_RS16445 (N0B18_16445) comX 3052659..3052880 (-) 222 WP_014480704.1 competence pheromone ComX -
  N0B18_RS16450 (N0B18_16450) - 3052882..3053745 (-) 864 WP_014480705.1 polyprenyl synthetase family protein -
  N0B18_RS16455 (N0B18_16455) degQ 3053930..3054070 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  N0B18_RS16460 (N0B18_16460) - 3054292..3054417 (+) 126 WP_003228793.1 hypothetical protein -
  N0B18_RS16465 (N0B18_16465) - 3054532..3054900 (+) 369 WP_046381300.1 hypothetical protein -
  N0B18_RS16470 (N0B18_16470) pdeH 3054876..3056105 (-) 1230 WP_046381301.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89747.04 Da        Isoelectric Point: 8.2535

>NTDB_id=726862 N0B18_RS16440 WP_069964288.1 3050331..3052643(-) (comP) [Bacillus subtilis strain SRCM117109]
MYRYINVYKYLSLVFIILSFIYVIYLSYSFAFNIFVGADVKINEQGKLEVTNVLDYTDEYYSCVKKGDIILEVNGEKGSD
IQLKSGRLVNVESLIVERDNKSFHLQNVSLISEENLFMYLIPVISYSICLFCIFFIYRINKVRKSTSAYILILFLLFVSV
AYVSACGARRGEEISTYLLVLTLVSCPVLYIHFIYKYFIELGTKLFEKKILIIMYMLPLINLLLEDVLSNRLKSSAFLSN
LNLISFFVLVLTVSILIHKGIRKFKQKEQKSILKVLAYTNIFSFSPFIVFFAVPYVFFEKYVSPFSLAAFTLVIPFSLVY
QFMTNRLYNIDFVVGRLKYYGFLAITPTIIVVTIFNYIQQPKDIFYLVKLTIAIYVLMFAVFYFKEIIDFRFKLKRFTEK
FNYQDGIFKFTQLIKQASSVDQVLNHFKNTILEVLNIDNACVYDNSKGEIILLSKNNFKDLTYKNHEQYVKNFSGDIGKI
KEFKQGFIIKIGERGDRSFLVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKL
MYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDENPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLY
DLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDD
GIGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=726862 N0B18_RS16440 WP_069964288.1 3050331..3052643(-) (comP) [Bacillus subtilis strain SRCM117109]
ATGTACAGATATATTAACGTCTATAAATATTTGTCTCTAGTTTTTATCATTTTAAGTTTTATTTATGTTATATACCTCTC
GTATAGCTTTGCTTTTAACATCTTCGTAGGTGCGGATGTAAAGATAAATGAACAGGGTAAGTTAGAGGTCACCAATGTTT
TAGATTATACAGATGAATATTATTCATGTGTGAAAAAGGGAGATATCATTCTTGAAGTAAATGGGGAGAAAGGCAGTGAT
ATTCAATTAAAAAGTGGAAGATTGGTCAATGTAGAAAGTTTAATTGTTGAGAGAGATAATAAATCATTTCATTTACAAAA
TGTAAGCCTAATCAGTGAAGAAAATTTATTTATGTATCTCATTCCTGTAATATCTTATTCAATCTGTTTATTTTGTATAT
TTTTTATTTATAGAATAAATAAAGTAAGAAAATCAACTTCTGCTTATATTTTAATTTTATTTTTGTTATTTGTATCAGTA
GCGTATGTAAGTGCATGTGGAGCAAGAAGAGGTGAAGAGATAAGCACTTATCTGCTTGTTCTTACTTTAGTCAGTTGTCC
GGTGTTATATATTCATTTTATATATAAATACTTTATAGAATTAGGAACAAAGTTATTCGAAAAGAAGATTTTAATCATTA
TGTATATGCTCCCGCTAATAAATCTTTTATTAGAGGACGTTCTGAGTAATAGATTAAAATCTTCGGCTTTTTTGTCTAAT
CTGAATTTGATTTCATTTTTTGTCCTAGTTCTTACTGTATCGATTCTTATCCATAAAGGGATAAGAAAATTTAAACAAAA
AGAGCAAAAGTCAATTTTGAAAGTCCTTGCTTATACAAATATCTTTTCTTTCAGTCCGTTTATTGTCTTTTTTGCTGTTC
CATATGTGTTTTTCGAGAAGTATGTCTCACCTTTTAGTTTGGCTGCTTTTACACTTGTTATACCTTTTTCTTTAGTATAT
CAATTTATGACTAATAGACTTTATAATATCGACTTTGTTGTGGGGCGGCTTAAGTACTACGGTTTTTTAGCCATTACACC
TACTATTATCGTAGTGACCATCTTTAATTACATTCAGCAACCAAAGGATATCTTTTATTTAGTTAAACTAACAATTGCAA
TATATGTTCTTATGTTTGCCGTTTTTTACTTTAAAGAAATCATTGATTTTCGTTTCAAGTTGAAAAGATTTACAGAGAAA
TTTAATTATCAAGATGGGATTTTTAAATTTACTCAGTTGATTAAGCAAGCATCATCAGTAGATCAAGTACTTAATCACTT
TAAAAATACAATCCTAGAAGTATTAAACATAGATAATGCTTGCGTGTATGATAATTCTAAAGGGGAAATCATCCTTCTTA
GTAAGAACAACTTTAAAGATCTGACTTATAAAAATCATGAGCAATATGTGAAAAATTTTTCTGGTGATATCGGTAAAATT
AAAGAGTTTAAACAAGGTTTTATTATTAAAATAGGTGAACGAGGAGACAGATCATTTTTAGTACTCTGTTTCTCAAGTTA
TAATACTTTTAAGTTAACAAGGGATGAAATTGCATGGCTTCAAACATTAGCATTTTATACAAATGTCTCATTGGAAAACG
TTATGAAAATCGAAGAATTGATGGTGCATCTTGAGGATTTAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTC
ATGTACACGATCGAGGAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCCGTTCTTCAGGATTTGATTTCATT
AAAACGCCAGTGTGAGCTGTTTCTGGGTGATTTCAAGAAGGATGAAAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTG
TGCAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTAT
GATCTTGGATTGGTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATAC
CGGGAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGG
TCAAGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGAT
GGCATAGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGC
TTTAGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.104

100

0.561