Detailed information NTG0726311

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: NYR19_RS00750
• Genome accession: NZ_CP103874
• Coordinates: 162363..163565 (-)
• Length: 400 a.a.
• NCBI ID: WP_302508604.1
• Uniprot ID: -
• Organism: Gallibacterium anatis strain TH22
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 157363..168565

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYR19_RS00740 (NYR19_00740)	-	158491..160668 (+)	2178	WP_302508602.1	type I secretion system permease/ATPase	-
NYR19_RS00745 (NYR19_00745)	-	160678..162018 (+)	1341	WP_302508603.1	HlyD family efflux transporter periplasmic adaptor subunit	-
NYR19_RS00750 (NYR19_00750)	dprA	162363..163565 (-)	1203	WP_302508604.1	DNA-processing protein DprA	Machinery gene
NYR19_RS00755 (NYR19_00755)	def	163768..164283 (+)	516	WP_039162471.1	peptide deformylase	-
NYR19_RS00760 (NYR19_00760)	-	164664..165387 (+)	724	Protein_137	RNA-guided endonuclease TnpB family protein	-
NYR19_RS00770 (NYR19_00770)	-	165561..166313 (+)	753	WP_013746033.1	DeoR/GlpR family DNA-binding transcription regulator	-
NYR19_RS00775 (NYR19_00775)	fucI	166533..168290 (+)	1758	WP_302508605.1	L-fucose isomerase	-

Sequence

Protein

• Length: 400 a.a.
• Molecular weight: 43519.89 Da
• Isoelectric Point: 6.8807

>NTDB_id=726311 NYR19_RS00750 WP_302508604.1 162363..163565(-) (dprA) [Gallibacterium anatis strain TH22]
MQTVTTLLRLALLPQFGAIKIQQLLEQISLDTLLSYDRQTLSQIGWNAAQIQAWYSPQQAIIDSILNWQQQAGNHILHYF
DHSYPFLLKQTRSAPPLLFVKGNIDVLSSPQIAMVGSRYCSPYGEHYAQTIAGELAHSGITINSGLALGIDGICHRAALD
NHGKTVAVLGSGLDQLYPARHKKLAQQILENNGALLSELFPDTPPIAENFPRRNRIISGLSFGTIVIEASQKSGSLITAR
LALEQNREVFAVPGALDNPLSQGCHHLIKQGAWLIENAQDVLEILTPQISSLMPFTPAIAAQTPTPTGNRSTAQNTIAIS
PQAKSGYTPPTINKKAVIKLDIPPQHQALMQQLNSATAISPDELSTALNRPIDQILTDLLELEILGAVQQIQGGYIKNIV

Nucleotide

• Length: 1203 bp

>NTDB_id=726311 NYR19_RS00750 WP_302508604.1 162363..163565(-) (dprA) [Gallibacterium anatis strain TH22]
ATGCAAACAGTAACCACACTTTTACGTTTAGCACTGCTGCCGCAATTCGGTGCTATCAAAATTCAACAACTGCTTGAACA
AATCTCGCTAGATACGCTACTCAGCTACGATCGACAAACACTCAGCCAAATCGGTTGGAACGCTGCGCAAATTCAAGCTT
GGTACTCGCCGCAACAAGCAATTATTGACTCCATTCTAAATTGGCAGCAACAGGCAGGAAATCATATTCTGCACTATTTT
GATCACAGTTATCCATTCTTGTTGAAACAAACTCGCTCCGCACCACCATTGCTGTTTGTTAAAGGTAACATTGATGTACT
TTCTTCGCCACAAATCGCTATGGTAGGTAGTCGCTATTGTTCACCTTATGGCGAACATTACGCCCAAACTATTGCCGGCG
AACTGGCACATAGCGGCATCACCATTAACAGCGGTTTAGCCTTAGGCATTGATGGCATTTGTCATCGTGCCGCTTTGGAT
AATCACGGCAAAACCGTTGCTGTTTTGGGCAGCGGCTTGGATCAACTTTATCCGGCTCGCCACAAAAAATTGGCACAACA
GATTCTGGAAAACAATGGTGCATTGCTGTCGGAGCTGTTTCCCGACACGCCGCCCATTGCCGAAAATTTTCCACGCCGAA
ACCGTATTATCAGCGGTCTCTCGTTCGGCACCATCGTCATCGAAGCCTCGCAAAAAAGTGGTTCATTAATTACTGCACGT
CTGGCATTGGAACAAAATCGCGAAGTATTCGCCGTTCCAGGTGCATTGGACAATCCATTGAGTCAAGGTTGCCATCACTT
AATCAAACAAGGGGCGTGGTTAATTGAAAATGCACAGGATGTGTTGGAAATTCTAACACCGCAAATTTCATCATTAATGC
CGTTTACACCAGCAATAGCAGCGCAAACACCAACGCCAACCGGCAATCGCTCTACTGCACAGAACACGATCGCAATATCG
CCACAAGCAAAATCCGGTTACACGCCGCCGACCATCAACAAAAAAGCGGTGATCAAACTTGATATTCCACCACAACATCA
AGCATTAATGCAACAATTAAACAGTGCAACTGCGATTTCACCGGATGAACTTTCGACAGCATTAAATCGCCCTATCGATC
AAATTCTTACCGATCTATTGGAACTGGAAATTCTCGGTGCAGTGCAACAGATTCAAGGAGGTTATATTAAAAATATCGTC
TAA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (344-394)

• DNA recombination-mediator protein A (DNA_processg_A) (70-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Glaesserella parasuis strain SC1401	48.99	99	0.485
dprA	Haemophilus influenzae Rd KW20	51.622	92.5	0.478
dprA	Vibrio campbellii strain DS40M4	43.367	98	0.425
dprA	Legionella pneumophila strain ERS1305867	37.811	100	0.38