Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | NYR91_RS12330 | Genome accession | NZ_CP103784 |
| Coordinates | 2406253..2407290 (-) | Length | 345 a.a. |
| NCBI ID | WP_014477333.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain RO-NN-1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2401253..2412290
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NYR91_RS12280 (NYR91_12280) | tasA | 2401347..2402132 (-) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| NYR91_RS12285 (NYR91_12285) | sipW | 2402197..2402769 (-) | 573 | WP_014477325.1 | signal peptidase I SipW | - |
| NYR91_RS12290 (NYR91_12290) | tapA | 2402753..2403514 (-) | 762 | WP_014477326.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NYR91_RS12295 (NYR91_12295) | yqzG | 2403788..2404114 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| NYR91_RS12300 (NYR91_12300) | spoIITA | 2404156..2404335 (-) | 180 | WP_014477327.1 | YqzE family protein | - |
| NYR91_RS12305 (NYR91_12305) | comGG | 2404407..2404781 (-) | 375 | WP_014477328.1 | ComG operon protein ComGG | Machinery gene |
| NYR91_RS12310 (NYR91_12310) | comGF | 2404782..2405165 (-) | 384 | WP_041519396.1 | ComG operon protein ComGF | Machinery gene |
| NYR91_RS12315 (NYR91_12315) | comGE | 2405191..2405538 (-) | 348 | WP_014477330.1 | ComG operon protein 5 | Machinery gene |
| NYR91_RS12320 (NYR91_12320) | comGD | 2405522..2405953 (-) | 432 | WP_014477331.1 | comG operon protein ComGD | Machinery gene |
| NYR91_RS12325 (NYR91_12325) | comGC | 2405943..2406239 (-) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
| NYR91_RS12330 (NYR91_12330) | comGB | 2406253..2407290 (-) | 1038 | WP_014477333.1 | comG operon protein ComGB | Machinery gene |
| NYR91_RS12335 (NYR91_12335) | comGA | 2407277..2408347 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| NYR91_RS12340 (NYR91_12340) | corA | 2408758..2409711 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| NYR91_RS12345 (NYR91_12345) | yqhB | 2409854..2411182 (+) | 1329 | WP_014477335.1 | hemolysin family protein | - |
| NYR91_RS12350 (NYR91_12350) | rsbRD | 2411234..2412070 (-) | 837 | WP_014477336.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39826.21 Da Isoelectric Point: 9.4123
>NTDB_id=725024 NYR91_RS12330 WP_014477333.1 2406253..2407290(-) (comGB) [Bacillus subtilis strain RO-NN-1]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPAWQMLICVRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIEAAICESPFYETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPAWQMLICVRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIEAAICESPFYETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=725024 NYR91_RS12330 WP_014477333.1 2406253..2407290(-) (comGB) [Bacillus subtilis strain RO-NN-1]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAAAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCTGGCAAATGCTGATTTGTGTCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTATT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGAAAGCCCTTTTTATGAAACTGATTTTTCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGCGAGCTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCGATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAAAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCTGGCAAATGCTGATTTGTGTCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTATT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGAAAGCCCTTTTTATGAAACTGATTTTTCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGCGAGCTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCGATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
98.142 |
93.623 |
0.919 |