Detailed information NTG0725023

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: PYZ88_RS22370
• Genome accession: NZ_CP119120
• Coordinates: 4589676..4590659 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain GENOMIC22-004
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4584676..4595659

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PYZ88_RS22340 (PYZ88_22320)	-	4585342..4585449 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
PYZ88_RS22345 (PYZ88_22325)	-	4585825..4585932 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
PYZ88_RS22350 (PYZ88_22330)	-	4586308..4586415 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
PYZ88_RS22355 (PYZ88_22335)	-	4586791..4586898 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
PYZ88_RS22360 (PYZ88_22340)	yhjV	4587374..4588645 (+)	1272	WP_001296805.1	aromatic amino acid transport family protein	-
PYZ88_RS22365 (PYZ88_22345)	dppF	4588675..4589679 (-)	1005	WP_000107031.1	dipeptide ABC transporter ATP-binding subunit DppF	-
PYZ88_RS22370 (PYZ88_22350)	amiE	4589676..4590659 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
PYZ88_RS22375 (PYZ88_22355)	dppC	4590670..4591572 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
PYZ88_RS22380 (PYZ88_22360)	dppB	4591582..4592601 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
PYZ88_RS22385 (PYZ88_22365)	dppA	4592909..4594516 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=725023 PYZ88_RS22370 WP_001196486.1 4589676..4590659(-) (amiE) [Escherichia coli strain GENOMIC22-004]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=725023 PYZ88_RS22370 WP_001196486.1 4589676..4590659(-) (amiE) [Escherichia coli strain GENOMIC22-004]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404