Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   PXV46_RS07370 Genome accession   NZ_CP119113
Coordinates   1467498..1468121 (-) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain GENOMIC22-002     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1462498..1473121
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PXV46_RS07345 (PXV46_07345) rpmG 1464075..1464224 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  PXV46_RS07350 (PXV46_07350) rpsN 1464678..1464947 (+) 270 WP_001085655.1 30S ribosomal protein S14 -
  PXV46_RS07355 (PXV46_07355) guaC 1465104..1466081 (+) 978 WP_000688126.1 GMP reductase -
  PXV46_RS07365 (PXV46_07365) - 1466103..1467119 (+) 1017 WP_169428106.1 CAP domain-containing protein -
  PXV46_RS07370 (PXV46_07370) dinR/lexA 1467498..1468121 (-) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  PXV46_RS07375 (PXV46_07375) sosA 1468264..1468497 (+) 234 WP_000499646.1 DNA damage-induced cell division inhibitor SosA -
  PXV46_RS07380 (PXV46_07380) - 1468633..1468872 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  PXV46_RS07385 (PXV46_07385) recP/tkt 1468993..1470981 (+) 1989 WP_000481439.1 transketolase Machinery gene
  PXV46_RS07390 (PXV46_07390) - 1471259..1471501 (+) 243 WP_000246909.1 YneF family protein -
  PXV46_RS07395 (PXV46_07395) - 1471488..1471586 (+) 99 WP_001789897.1 hypothetical protein -
  PXV46_RS07400 (PXV46_07400) - 1471680..1472147 (+) 468 WP_000966144.1 CcdC family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=724902 PXV46_RS07370 WP_001208755.1 1467498..1468121(-) (dinR/lexA) [Staphylococcus aureus strain GENOMIC22-002]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=724902 PXV46_RS07370 WP_001208755.1 1467498..1468121(-) (dinR/lexA) [Staphylococcus aureus strain GENOMIC22-002]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAGGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTATCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657