Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   NYR92_RS02170 Genome accession   NZ_CP103783
Coordinates   429441..429563 (+) Length   40 a.a.
NCBI ID   WP_003224994.1    Uniprot ID   G4NQY6
Organism   Bacillus subtilis subsp. subtilis str. 168     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 424441..434563
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYR92_RS02155 (NYR92_02155) yclJ 426055..426738 (+) 684 WP_003246532.1 two-component system response regulator YclJ -
  NYR92_RS02160 (NYR92_02160) yclK 426725..428146 (+) 1422 WP_009969263.1 two-component system sensor histidine kinase YclK -
  NYR92_RS02165 (NYR92_02165) rapC 428309..429457 (+) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator
  NYR92_RS02170 (NYR92_02170) phrC 429441..429563 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  NYR92_RS02175 (NYR92_02175) yczM 429663..429752 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  NYR92_RS02180 (NYR92_02180) yczN 429834..429947 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  NYR92_RS02185 (NYR92_02185) thrD 430101..431465 (-) 1365 WP_009966541.1 aspartate kinase -
  NYR92_RS02190 (NYR92_02190) ceuB 431850..432800 (+) 951 WP_003234491.1 petrobactin ABC transporter permease YclN Machinery gene
  NYR92_RS02195 (NYR92_02195) yclO 432793..433740 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  NYR92_RS02200 (NYR92_02200) yclP 433734..434492 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -

Sequence

Protein


Download         Length: 40 a.a.        Molecular weight: 4197.98 Da        Isoelectric Point: 8.0285

>NTDB_id=724901 NYR92_RS02170 WP_003224994.1 429441..429563(+) (phrC) [Bacillus subtilis subsp. subtilis str. 168]
MKLKSKLFVICLAAAAIFTAAGVSANAEALDFHVTERGMT

Nucleotide


Download         Length: 123 bp        

>NTDB_id=724901 NYR92_RS02170 WP_003224994.1 429441..429563(+) (phrC) [Bacillus subtilis subsp. subtilis str. 168]
ATGAAATTGAAATCTAAGTTGTTTGTTATTTGTTTGGCCGCAGCCGCGATTTTTACAGCGGCTGGCGTTTCTGCTAATGC
GGAAGCACTCGACTTTCATGTGACAGAAAGAGGAATGACGTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-40)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NQY6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

100

100

1