Detailed information NTG0724883

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: NYR48_RS17175
• Genome accession: NZ_CP103782
• Coordinates: 3476593..3477756 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain DA4
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3471593..3482756

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYR48_RS17145	-	3471857..3472276 (-)	420	WP_025285352.1	TIGR03826 family flagellar region protein	-
NYR48_RS17150	comFC	3472350..3473039 (-)	690	WP_259425650.1	phosphoribosyltransferase family protein	Machinery gene
NYR48_RS17155	-	3473045..3473329 (-)	285	WP_007407481.1	late competence development ComFB family protein	-
NYR48_RS17160	comFA	3473387..3474772 (-)	1386	WP_259424626.1	DEAD/DEAH box helicase	Machinery gene
NYR48_RS17165	-	3474881..3475729 (-)	849	WP_259424627.1	DegV family protein	-
NYR48_RS17170	degU	3475827..3476516 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
NYR48_RS17175	degS	3476593..3477756 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
NYR48_RS17180	-	3477979..3478626 (+)	648	WP_259424628.1	YigZ family protein	-
NYR48_RS17185	-	3478631..3479824 (+)	1194	WP_259424629.1	LCP family protein	-
NYR48_RS17190	-	3479923..3480999 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
NYR48_RS17195	-	3481132..3482328 (-)	1197	WP_259424630.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=724883 NYR48_RS17175 WP_007407484.1 3476593..3477756(-) (degS) [Bacillus velezensis strain DA4]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=724883 NYR48_RS17175 WP_007407484.1 3476593..3477756(-) (degS) [Bacillus velezensis strain DA4]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCGGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTAGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCACAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951