Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   PWP91_RS02940 Genome accession   NZ_CP118738
Coordinates   578616..579398 (+) Length   260 a.a.
NCBI ID   WP_010905316.1    Uniprot ID   Q9CIG2
Organism   Lactococcus lactis strain P-1     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 573616..584398
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PWP91_RS02915 (PWP91_02915) vicX 573639..574451 (-) 813 WP_003131583.1 MBL fold metallo-hydrolase Regulator
  PWP91_RS02920 (PWP91_02920) vicK 574622..576064 (-) 1443 WP_274998800.1 sensor histidine kinase Regulator
  PWP91_RS02925 (PWP91_02925) yycF 576057..576758 (-) 702 WP_003131580.1 response regulator YycF -
  PWP91_RS02930 (PWP91_02930) tmk 576936..577571 (+) 636 WP_274998801.1 dTMP kinase -
  PWP91_RS02935 (PWP91_02935) - 577704..578564 (+) 861 WP_003131573.1 DNA polymerase III subunit delta' -
  PWP91_RS02940 (PWP91_02940) yaaT 578616..579398 (+) 783 WP_010905316.1 PSP1 domain-containing protein Regulator
  PWP91_RS02945 (PWP91_02945) yabA 579391..579717 (+) 327 WP_011675472.1 DNA replication initiation control protein YabA -
  PWP91_RS02950 (PWP91_02950) rsmI 579717..580592 (+) 876 WP_058203377.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  PWP91_RS02955 (PWP91_02955) - 580669..580860 (-) 192 WP_003131566.1 hypothetical protein -
  PWP91_RS02960 (PWP91_02960) mvk 580923..581855 (-) 933 WP_003131564.1 mevalonate kinase -
  PWP91_RS02965 (PWP91_02965) mvaD 582161..583117 (+) 957 WP_274998802.1 diphosphomevalonate decarboxylase -
  PWP91_RS02970 (PWP91_02970) - 583104..584093 (+) 990 WP_021721904.1 mevalonate kinase family protein -

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29803.27 Da        Isoelectric Point: 6.0566

>NTDB_id=723534 PWP91_RS02940 WP_010905316.1 578616..579398(+) (yaaT) [Lactococcus lactis strain P-1]
MIYEIKFAHGESNVFAISDIELAPQTEVILRSDKGNFYGKIVREISEEANLEIHHTIVREVNEDDLQVIAKLEERSKQAK
DKVRQLVIEQGLEMKIIDVAYNFDQMQLFISFTAENRVDFRLLLRELATTFRIRIELRQIGPRDAAKIHGGLGPCGRPLC
CSEFVYEFPNVSIKMAKNQNLSLKQNKLNGLCGRLMCCLTYEDSFYKEAQQLFPDFGEFVTTSEGKGKVVGLNVLKNRVK
IRFGEYSKDFELAEIEVNHG

Nucleotide


Download         Length: 783 bp        

>NTDB_id=723534 PWP91_RS02940 WP_010905316.1 578616..579398(+) (yaaT) [Lactococcus lactis strain P-1]
ATGATTTATGAAATAAAATTTGCACATGGCGAATCAAATGTATTTGCAATAAGTGATATAGAACTTGCTCCACAAACAGA
AGTTATCCTTCGTTCAGATAAGGGAAACTTTTACGGAAAAATTGTACGTGAAATTTCTGAAGAAGCGAATCTTGAAATTC
ACCACACGATTGTGCGTGAAGTAAATGAGGATGATCTCCAAGTTATTGCAAAACTTGAAGAACGTTCTAAACAAGCCAAA
GATAAAGTTCGCCAACTTGTCATCGAACAAGGTTTGGAAATGAAAATTATTGATGTTGCTTATAATTTCGACCAAATGCA
ACTTTTTATTTCGTTTACAGCAGAGAATCGTGTTGATTTTCGATTGCTTTTGCGTGAGTTGGCAACAACTTTTAGAATTA
GGATTGAACTTCGCCAAATTGGGCCAAGAGATGCGGCTAAAATTCATGGTGGACTTGGACCTTGTGGACGTCCTTTGTGC
TGTTCTGAGTTTGTTTATGAATTTCCAAATGTTTCAATCAAAATGGCCAAAAATCAAAATCTATCTTTGAAACAAAATAA
ATTGAACGGTCTTTGCGGTCGTTTGATGTGCTGTTTAACTTATGAAGATAGTTTTTATAAAGAAGCCCAACAACTTTTCC
CAGATTTTGGTGAGTTTGTAACTACCTCAGAAGGAAAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTAAAA
ATCCGCTTTGGAGAATATAGCAAGGATTTTGAACTTGCAGAAATTGAGGTGAATCATGGCTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(56-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9CIG2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

46.119

84.231

0.388