Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   PWP91_RS02915 Genome accession   NZ_CP118738
Coordinates   573639..574451 (-) Length   270 a.a.
NCBI ID   WP_003131583.1    Uniprot ID   Q9CIG7
Organism   Lactococcus lactis strain P-1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 568639..579451
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PWP91_RS02890 (PWP91_02890) ytpR 568865..569491 (+) 627 WP_058204083.1 YtpR family tRNA-binding protein -
  PWP91_RS02895 (PWP91_02895) nox 569653..570993 (+) 1341 WP_023188995.1 H2O-forming NADH oxidase -
  PWP91_RS02900 (PWP91_02900) ssbB 571083..571472 (+) 390 WP_010905314.1 single-stranded DNA-binding protein Machinery gene
  PWP91_RS02905 (PWP91_02905) groES 571592..571876 (+) 285 WP_003131589.1 co-chaperone GroES -
  PWP91_RS02910 (PWP91_02910) groL 571964..573592 (+) 1629 WP_003131585.1 chaperonin GroEL -
  PWP91_RS02915 (PWP91_02915) vicX 573639..574451 (-) 813 WP_003131583.1 MBL fold metallo-hydrolase Regulator
  PWP91_RS02920 (PWP91_02920) vicK 574622..576064 (-) 1443 WP_274998800.1 sensor histidine kinase Regulator
  PWP91_RS02925 (PWP91_02925) yycF 576057..576758 (-) 702 WP_003131580.1 response regulator YycF -
  PWP91_RS02930 (PWP91_02930) tmk 576936..577571 (+) 636 WP_274998801.1 dTMP kinase -
  PWP91_RS02935 (PWP91_02935) - 577704..578564 (+) 861 WP_003131573.1 DNA polymerase III subunit delta' -
  PWP91_RS02940 (PWP91_02940) yaaT 578616..579398 (+) 783 WP_010905316.1 PSP1 domain-containing protein Regulator

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30522.37 Da        Isoelectric Point: 5.8494

>NTDB_id=723531 PWP91_RS02915 WP_003131583.1 573639..574451(-) (vicX) [Lactococcus lactis strain P-1]
MTEQNGFKYSILASGSTGNSFYLETPKKKILVDAGLSGKKIESLLSEIDRDIHDIDALLITHEHSDHIKGIGVLARKYGI
DLYANEDTWSELDSKNALGKIPVEQKHLFEMGKTMTFGDIDIESFGVSHDAIAPQFYRFMKDNKSFVMLTDTGYVSDRMR
GTIENADAYLMESNHDIEILRMGAYPWRTKQRILSDQGHLSNEDGAEAAFSIHGNKTKRIFLGHLSLNNNIKELAHLTMD
GYLQQHDVDTKKDLKILDTSHEHASQLYDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=723531 PWP91_RS02915 WP_003131583.1 573639..574451(-) (vicX) [Lactococcus lactis strain P-1]
ATGACTGAACAAAATGGCTTTAAATATTCCATTTTAGCCTCTGGTTCAACAGGAAATTCTTTTTACTTAGAAACCCCAAA
GAAAAAAATTCTTGTTGATGCCGGACTATCTGGAAAAAAAATAGAAAGTTTACTATCAGAAATTGACCGTGACATTCATG
ATATTGATGCTTTATTAATTACCCATGAACATAGTGACCATATCAAAGGGATTGGTGTTTTGGCAAGAAAATATGGTATT
GACCTTTACGCAAATGAAGATACTTGGTCTGAACTAGATAGTAAAAATGCTTTAGGAAAAATCCCTGTTGAACAAAAACA
TCTGTTTGAAATGGGAAAAACAATGACTTTTGGTGATATTGATATTGAATCTTTCGGCGTGAGTCACGATGCCATCGCAC
CACAGTTTTATCGTTTCATGAAAGATAACAAGAGTTTTGTTATGCTAACTGATACAGGTTATGTATCCGATAGAATGCGT
GGAACCATTGAAAATGCAGATGCTTATCTTATGGAATCAAACCATGACATTGAGATACTCCGCATGGGAGCTTATCCTTG
GCGGACAAAGCAACGTATCCTAAGTGATCAGGGCCACTTATCTAATGAGGACGGCGCTGAGGCTGCTTTTAGTATTCATG
GTAATAAGACAAAACGAATCTTTCTAGGGCACTTGAGTTTAAATAATAATATCAAAGAACTTGCTCATCTTACTATGGAT
GGTTACTTACAGCAACATGATGTCGATACCAAAAAGGACCTGAAGATCCTTGATACTAGTCACGAACATGCTAGTCAACT
TTACGATATTTAG

Domains

Predicted by InterProScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9CIG7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

68.519

100

0.685