Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Machinery gene
Locus tag   NX819_RS14335 Genome accession   NZ_CP103351
Coordinates   2756610..2757356 (-) Length   248 a.a.
NCBI ID   WP_010886586.1    Uniprot ID   A0AAE2SM29
Organism   Bacillus subtilis strain SRCM115947     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2751610..2762356
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX819_RS14310 (NX819_14310) mreC 2752016..2752888 (-) 873 WP_009967915.1 rod shape-determining protein MreC -
  NX819_RS14315 (NX819_14315) mreB 2752919..2753932 (-) 1014 WP_003229650.1 cell shape-determining protein MreB -
  NX819_RS14320 (NX819_14320) radC 2754024..2754719 (-) 696 WP_003246034.1 DNA repair protein RadC -
  NX819_RS14325 (NX819_14325) maf 2754756..2755325 (-) 570 WP_004398496.1 Maf family nucleotide pyrophosphatase -
  NX819_RS14330 (NX819_14330) spoIIB 2755478..2756476 (-) 999 WP_110109450.1 stage II sporulation protein SpoIIB -
  NX819_RS14335 (NX819_14335) comC 2756610..2757356 (-) 747 WP_010886586.1 A24 family peptidase Machinery gene
  NX819_RS14340 (NX819_14340) folC 2757496..2758788 (-) 1293 WP_003229640.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  NX819_RS14345 (NX819_14345) valS 2758848..2761490 (-) 2643 WP_004398606.1 valine--tRNA ligase -
  NX819_RS14350 (NX819_14350) - 2761936..2762127 (+) 192 WP_003222590.1 hypothetical protein -

Sequence

Protein


Download         Length: 248 a.a.        Molecular weight: 26435.04 Da        Isoelectric Point: 9.7944

>NTDB_id=722235 NX819_RS14335 WP_010886586.1 2756610..2757356(-) (comC) [Bacillus subtilis strain SRCM115947]
MLSILFIFGLILGSFYYTAGCRIPLHLSIIAPRSSCPFCRRTLTPAELIPILSFLFQKGKCKSCGHRISFMYPAAELVTA
CLFAAAGIRFGISLELFPAVVFISLLIIVAVTDIHFMLIPNRILIFFLPFLAAARLISPLDSWYAGLLGAAAGFLFLAVI
AAITHGGVGGGDIKLFAVIGFVLGVKMLAAAFFFSVLIGALYGAAAVLTGRLAKRQPLPFAPAIAAGSILAYLYGDSIIS
FYIKMALG

Nucleotide


Download         Length: 747 bp        

>NTDB_id=722235 NX819_RS14335 WP_010886586.1 2756610..2757356(-) (comC) [Bacillus subtilis strain SRCM115947]
ATGCTATCCATTCTTTTTATCTTCGGGCTTATCCTTGGTTCTTTTTACTATACGGCCGGGTGCCGTATCCCCTTACATCT
ATCTATTATTGCGCCCCGTTCATCATGCCCGTTTTGCCGGCGAACATTAACTCCTGCAGAATTAATTCCCATCCTGTCAT
TCCTATTTCAAAAAGGTAAATGTAAAAGCTGCGGGCATAGGATTTCTTTTATGTATCCCGCAGCAGAGCTTGTGACAGCG
TGTTTATTTGCCGCCGCAGGAATACGCTTTGGCATATCGCTGGAACTGTTTCCCGCTGTGGTGTTTATCTCTCTTCTCAT
TATTGTTGCAGTGACAGATATTCATTTTATGCTGATTCCAAATCGAATATTGATTTTCTTTCTTCCCTTTTTGGCGGCCG
CGAGATTGATTTCTCCGCTTGATTCCTGGTATGCAGGCCTGTTAGGTGCGGCAGCCGGATTTTTGTTTCTGGCTGTAATT
GCCGCAATCACCCATGGGGGAGTAGGGGGAGGAGATATTAAATTATTTGCGGTGATTGGCTTTGTGCTTGGTGTGAAAAT
GCTGGCAGCTGCCTTTTTCTTTTCAGTTTTGATAGGTGCATTATATGGAGCGGCAGCTGTTCTGACTGGTAGACTCGCTA
AAAGGCAGCCGCTTCCCTTCGCCCCCGCTATAGCCGCAGGGAGCATTTTAGCCTATTTATACGGTGACTCTATCATTTCT
TTTTATATCAAAATGGCATTGGGCTGA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(7-90)

Type IV leader peptidase family (Peptidase_A24)

(101-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Bacillus subtilis subsp. subtilis str. 168

100

100

1