Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | NX062_RS12345 | Genome accession | NZ_CP103328 |
| Coordinates | 2309216..2310253 (-) | Length | 345 a.a. |
| NCBI ID | WP_029317912.1 | Uniprot ID | A0A162U359 |
| Organism | Bacillus subtilis strain KC14-1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2304216..2315253
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NX062_RS12295 (NX062_12290) | tasA | 2304313..2305098 (-) | 786 | WP_014480250.1 | biofilm matrix protein TasA | - |
| NX062_RS12300 (NX062_12295) | sipW | 2305162..2305734 (-) | 573 | WP_003230181.1 | signal peptidase I SipW | - |
| NX062_RS12305 (NX062_12300) | tapA | 2305718..2306479 (-) | 762 | WP_014480251.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NX062_RS12310 (NX062_12305) | yqzG | 2306751..2307077 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| NX062_RS12315 (NX062_12310) | spoIITA | 2307119..2307298 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| NX062_RS12320 (NX062_12315) | comGG | 2307370..2307744 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| NX062_RS12325 (NX062_12320) | comGF | 2307745..2308128 (-) | 384 | WP_046160582.1 | ComG operon protein ComGF | Machinery gene |
| NX062_RS12330 (NX062_12325) | comGE | 2308154..2308501 (-) | 348 | WP_046160583.1 | ComG operon protein 5 | Machinery gene |
| NX062_RS12335 (NX062_12330) | comGD | 2308485..2308916 (-) | 432 | WP_014480256.1 | comG operon protein ComGD | Machinery gene |
| NX062_RS12340 (NX062_12335) | comGC | 2308906..2309202 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| NX062_RS12345 (NX062_12340) | comGB | 2309216..2310253 (-) | 1038 | WP_029317912.1 | comG operon protein ComGB | Machinery gene |
| NX062_RS12350 (NX062_12345) | comGA | 2310240..2311310 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| NX062_RS12355 (NX062_12350) | - | 2311522..2311719 (-) | 198 | WP_046160584.1 | CBS domain-containing protein | - |
| NX062_RS12360 (NX062_12355) | corA | 2311721..2312674 (-) | 954 | WP_015483432.1 | magnesium transporter CorA | - |
| NX062_RS12365 (NX062_12360) | yqhB | 2312817..2314145 (+) | 1329 | WP_046160586.1 | hemolysin family protein | - |
| NX062_RS12370 (NX062_12365) | rsbRD | 2314198..2315034 (-) | 837 | WP_015714260.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39662.10 Da Isoelectric Point: 9.7153
>NTDB_id=721989 NX062_RS12345 WP_029317912.1 2309216..2310253(-) (comGB) [Bacillus subtilis strain KC14-1]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=721989 NX062_RS12345 WP_029317912.1 2309216..2310253(-) (comGB) [Bacillus subtilis strain KC14-1]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGTGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGCCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGTGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGCCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.381 |
93.623 |
0.93 |