Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   NXY85_RS18450 Genome accession   NZ_CP103290
Coordinates   3639614..3639733 (+) Length   39 a.a.
NCBI ID   WP_004430266.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain NS2     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 3634614..3644733
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NXY85_RS18435 - 3636197..3636883 (+) 687 WP_106045683.1 response regulator transcription factor -
  NXY85_RS18440 - 3636870..3638288 (+) 1419 WP_258728609.1 HAMP domain-containing sensor histidine kinase -
  NXY85_RS18445 rapC 3638482..3639630 (+) 1149 WP_004430265.1 tetratricopeptide repeat protein Regulator
  NXY85_RS18450 phrC 3639614..3639733 (+) 120 WP_004430266.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  NXY85_RS18455 - 3639867..3639974 (-) 108 WP_072053240.1 YjcZ family sporulation protein -
  NXY85_RS18460 - 3640178..3640261 (-) 84 WP_370499808.1 YjcZ family sporulation protein -
  NXY85_RS18465 - 3640392..3641756 (-) 1365 WP_258728610.1 aspartate kinase -
  NXY85_RS18470 ceuB 3642188..3643138 (+) 951 WP_258728611.1 ABC transporter permease Machinery gene
  NXY85_RS18475 - 3643131..3644078 (+) 948 WP_010789704.1 iron chelate uptake ABC transporter family permease subunit -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4111.89 Da        Isoelectric Point: 7.9858

>NTDB_id=721701 NXY85_RS18450 WP_004430266.1 3639614..3639733(+) (phrC) [Bacillus atrophaeus strain NS2]
MKLKSKLLIICLAAAAVFATVGVSNAEAPDYQVTERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=721701 NXY85_RS18450 WP_004430266.1 3639614..3639733(+) (phrC) [Bacillus atrophaeus strain NS2]
ATGAAATTGAAATCTAAATTGCTCATTATTTGTTTGGCTGCAGCTGCTGTGTTTGCAACAGTTGGAGTGTCCAATGCTGA
AGCGCCTGATTATCAGGTGACAGAAAGAGGAATGACGTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

75

100

0.769